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Aliases for GC07P008190 Gene

Subcategory (RNA class) for GC07P008190 Gene


Quality Score for this RNA gene is


Aliases for GC07P008190 Gene

No Aliases found

ORGUL Members for GC07P008190 Gene

No data available for External Ids for GC07P008190 Gene

Summaries for GC07P008190 Gene

GeneCards Summary for GC07P008190 Gene

GC07P008190 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC07P008190 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC07P008190

Additional gene information for GC07P008190 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07P008190 Gene

Genomics for GC07P008190 Gene

GeneHancer (GH) Regulatory Elements for GC07P008190 Gene

Promoters and enhancers for GC07P008190 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I008189 Enhancer 1.1 Ensembl ENCODE dbSUPER 550.8 +0.1 138 1.3 CTCF RAD21 YY1 TEAD3 SMC3 ZNF143 RCOR1 BCLAF1 RUNX3 SMARCA5 GC07P008190 ENSG00000227719 LOC100505938 ICA1
GH07I008174 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.4 -13.3 -13261 4.3 HDGF PKNOX1 ATF1 FOXA2 ZFP64 IRF4 YY1 ZNF207 ATF7 RUNX3 ENSG00000227719 GLCCI1 GC07P008190 ICA1
GH07I008260 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE 0.2 +71.6 71622 2.9 PKNOX1 CLOCK ATF1 SIN3A YY1 POLR2B GLIS2 FOS ATF7 SP3 ENSG00000244239 ICA1 ENSG00000229970 LOC100505938 GC07P008190
GH07I008201 Enhancer 1 ENCODE dbSUPER 0.4 +11.8 11792 0.2 HDAC1 PKNOX1 TEAD4 TAL1 E4F1 CCNT2 TCF12 CTBP1 GATA2 POLR2A GLCCI1 LOC100505921 GC07P008190 LOC100505938 ICA1
GH07I008130 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -57.2 -57176 5.7 HDGF PKNOX1 ATF1 SMAD1 IRF4 TCF12 ZNF766 GATA2 ZNF207 ATF7 GLCCI1 ENSG00000227719 GC07P008190 ICA1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC07P008190 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC07P008190 Gene

Genomic Locations for GC07P008190 Gene
23 bases
Plus strand

Genomic View for GC07P008190 Gene

Genes around GC07P008190 on UCSC Golden Path with GeneCards custom track

GC07P008190 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P008190 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07P008190 Gene

ORGUL Member Location for GC07P008190 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P008190 Gene

Proteins for GC07P008190 Gene

Post-translational modifications for GC07P008190 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P008190 Gene

Domains & Families for GC07P008190 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P008190 Gene

Function for GC07P008190 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P008190 Gene

Localization for GC07P008190 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07P008190 Gene

Pathways & Interactions for GC07P008190 Gene

SuperPathways for GC07P008190 Gene

No Data Available

Interacting Proteins for GC07P008190 Gene

Gene Ontology (GO) - Biological Process for GC07P008190 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC07P008190 Gene

Drugs & Compounds for GC07P008190 Gene

No Compound Related Data Available

Transcripts for GC07P008190 Gene

fRNAdb Secondary structures for GC07P008190 Gene

  • FR025992
  • FR167424

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P008190 Gene

No ASD Table

Relevant External Links for GC07P008190 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC07P008190 Gene

Expression for GC07P008190 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P008190 Gene

Orthologs for GC07P008190 Gene

No data available for Orthologs and Evolution for GC07P008190 Gene

Paralogs for GC07P008190 Gene

No data available for Paralogs for GC07P008190 Gene

Variants for GC07P008190 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC07P008190 Gene

Disorders for GC07P008190 Gene

No disorders were found for GC07P008190 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P008190 Gene

Publications for GC07P008190 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC07P008190 Gene

Sources for GC07P008190 Gene

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