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Aliases for GC07P004689 Gene

Subcategory (RNA class) for GC07P004689 Gene


Quality Score for this RNA gene is


Aliases for GC07P004689 Gene

No Aliases found

ORGUL Members for GC07P004689 Gene

No data available for External Ids for GC07P004689 Gene

Summaries for GC07P004689 Gene

GeneCards Summary for GC07P004689 Gene

GC07P004689 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC07P004689 Gene

  • snoRNA: A snoRNA (small nucleolar RNA) is any one of a class of small RNAs that are associated with the eukaryotic nucleus as components of small nucleolar ribonucleoproteins. They participate in the processing or modifications of many RNAs, mostly ribosomal RNAs (rRNAs) though snoRNAs are also known to target other classes of RNA, including spliceosomal RNAs, tRNAs, and mRNAs via a stretch of sequence that is complementary to a sequence in the targeted RNA.

Additional gene information for GC07P004689 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07P004689 Gene

Genomics for GC07P004689 Gene

GeneHancer (GH) Regulatory Elements for GC07P004689 Gene

Promoters and enhancers for GC07P004689 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J004690 Enhancer 0.6 Ensembl dbSUPER 650.7 +0.8 822 0.2 HDGF ZBTB33 IKZF2 GC07P004689 SNORD13P2 GC07M004681 FOXK1
GH07J004688 Enhancer 0.6 dbSUPER 650.7 -0.5 -500 1.3 HDAC1 MEIS2 PKNOX1 SOX6 NR2F1 CBFA2T3 EBF1 MNT DPF2 TCF12 GC07P004689 SNORD13P2 GC07M004681 FOXK1
GH07J004691 Enhancer 0.6 Ensembl ENCODE dbSUPER 0.7 +2.7 2739 1.2 GC07P004689 GC07M004681 FOXK1
GH07J004693 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +5.1 5099 3.2 PKNOX1 MAFG ZNF316 KDM1A FOS NFE2 MAFK EMSY NFE2L2 AP5Z1 GC07P004689 GC07M004681 FOXK1
GH07J004699 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +11.1 11100 2.3 JUN ZNF407 ZIC2 ZNF121 POLR2A ZNF629 ZNF600 FOS CREM AP5Z1 GC07P004689 GC07M004681 FOXK1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC07P004689 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC07P004689 Gene

Genomic Locations for GC07P004689 Gene
105 bases
Plus strand

Genomic View for GC07P004689 Gene

Genes around GC07P004689 on UCSC Golden Path with GeneCards custom track

GC07P004689 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P004689 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P004689 Gene

Proteins for GC07P004689 Gene

Post-translational modifications for GC07P004689 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P004689 Gene

Domains & Families for GC07P004689 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P004689 Gene

Function for GC07P004689 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P004689 Gene

Localization for GC07P004689 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07P004689 Gene

Pathways & Interactions for GC07P004689 Gene

SuperPathways for GC07P004689 Gene

No Data Available

Interacting Proteins for GC07P004689 Gene

Gene Ontology (GO) - Biological Process for GC07P004689 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC07P004689 Gene

Drugs & Compounds for GC07P004689 Gene

No Compound Related Data Available

Transcripts for GC07P004689 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P004689 Gene

No ASD Table

Relevant External Links for GC07P004689 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC07P004689 Gene

Expression for GC07P004689 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P004689 Gene

Orthologs for GC07P004689 Gene

No data available for Orthologs and Evolution for GC07P004689 Gene

Paralogs for GC07P004689 Gene

No data available for Paralogs for GC07P004689 Gene

Variants for GC07P004689 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC07P004689 Gene

Disorders for GC07P004689 Gene

No disorders were found for GC07P004689 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P004689 Gene

Publications for GC07P004689 Gene

  1. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C … Chen R (Nucleic acids research 2005) 1
  2. Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes. (PMID: 10736225) Gaspin C … Bachellerie JP (Journal of molecular biology 2000) 1
  3. The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functions. (PMID: 8797828) Balakin AG … Fournier MJ (Cell 1996) 1

Products for GC07P004689 Gene

Sources for GC07P004689 Gene

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