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Aliases for GC07M121195 Gene

Subcategory (RNA class) for GC07M121195 Gene

snRNA

Quality Score for this RNA gene is

2

Aliases for GC07M121195 Gene

No Aliases found

ORGUL Members for GC07M121195 Gene

No data available for External Ids for GC07M121195 Gene

Summaries for GC07M121195 Gene

GeneCards Summary for GC07M121195 Gene

GC07M121195 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC07M121195 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

Additional gene information for GC07M121195 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07M121195 Gene

Genomics for GC07M121195 Gene

GeneHancer (GH) Regulatory Elements for GC07M121195 Gene

Promoters and enhancers for GC07M121195 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I121180 Enhancer 0.7 ENCODE 0.4 +14.3 14340 1.3 EBF1 BMI1 BATF IRF4 ZNF507 NFATC1 ATF7 IKZF2 RUNX3 ZNF687 GC07M121195 RNU6-517P GC07P121089 CPED1
GH07I121138 Enhancer 1.1 Ensembl ENCODE 0.2 +56.5 56504 0.8 PKNOX1 ATF1 ARNT FEZF1 IRF4 TCF12 ZNF766 E2F8 ATF7 RUNX3 CPED1 GC07P121089 GC07M121195 RNU6-517P
GH07I121277 Enhancer 1.1 Ensembl ENCODE 0.2 -83.8 -83789 2.2 ATF1 IRF4 TCF12 ATF7 RUNX3 JUNB NCOA1 ZNF592 MBD2 MEF2D CPED1 WNT16 GC07M121195 RNU6-517P
GH07I121108 Enhancer 0.7 ENCODE 0.2 +86.9 86935 0.2 CTCF RB1 ARNT GTF2E2 ZNF2 RAD21 RFX5 ZNF316 ZNF143 SMC3 CPED1 ING3 GC07P121089 GC07M121195 RNU6-517P
GH07I121201 Enhancer 0.3 ENCODE 0.4 -7.1 -7055 0.7 ZNF512 WNT16 GC07M121195 RNU6-517P CPED1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC07M121195 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC07M121195 Gene

Genomic Locations for GC07M121195 Gene
chr7:121,194,947-121,195,057
(GRCh38/hg38)
Size:
111 bases
Orientation:
Minus strand

Genomic View for GC07M121195 Gene

Genes around GC07M121195 on UCSC Golden Path with GeneCards custom track

GC07M121195 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07M121195 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC07M121195 Gene

Proteins for GC07M121195 Gene

Post-translational modifications for GC07M121195 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07M121195 Gene

Domains & Families for GC07M121195 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07M121195 Gene

Function for GC07M121195 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07M121195 Gene

Localization for GC07M121195 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07M121195 Gene

Pathways & Interactions for GC07M121195 Gene

SuperPathways for GC07M121195 Gene

No Data Available

Interacting Proteins for GC07M121195 Gene

Gene Ontology (GO) - Biological Process for GC07M121195 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07M121195 Gene

Drugs & Compounds for GC07M121195 Gene

No Compound Related Data Available

Transcripts for GC07M121195 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC07M121195 Gene

No ASD Table

Relevant External Links for GC07M121195 Gene

GeneLoc Exon Structure for
GC07M121195

No data available for mRNA/cDNA for GC07M121195 Gene

Expression for GC07M121195 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07M121195 Gene

Orthologs for GC07M121195 Gene

No data available for Orthologs and Evolution for GC07M121195 Gene

Paralogs for GC07M121195 Gene

No data available for Paralogs for GC07M121195 Gene

Variants for GC07M121195 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC07M121195 Gene

Disorders for GC07M121195 Gene

No disorders were found for GC07M121195 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07M121195 Gene

Publications for GC07M121195 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H … Engberg J (Journal of molecular biology 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

Products for GC07M121195 Gene

Sources for GC07M121195 Gene

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