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Aliases for GC07M115834 Gene

Subcategory (RNA class) for GC07M115834 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for GC07M115834 Gene

No Aliases found

ORGUL Members for GC07M115834 Gene

No data available for External Ids for GC07M115834 Gene

Summaries for GC07M115834 Gene

GeneCards Summary for GC07M115834 Gene

GC07M115834 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC07M115834 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC07M115834 Gene

Genomics for GC07M115834 Gene

GeneHancer (GH) Regulatory Elements for GC07M115834 Gene

Promoters and enhancers for GC07M115834 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I115811 Enhancer 0.9 VISTA UCNEbase 0.3 +20.3 20263 3.3 EZH2 GC07M115834 GC07P115791 PIR37923 ENSG00000199224
GH07I116029 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 0.1 -197.2 -197153 1.8 GATA3 CEBPB NFE2 SPI1 TFEC TES GC07P116118 GC07M115834 ENSG00000199224
GH07I115816 Enhancer 0.3 ENCODE 0.4 +16.8 16805 0.8 POU5F1 ENSG00000199224 GC07M115834 PIR37923 GC07P115791
GH07I115963 Promoter/Enhancer 1.1 EPDnew ENCODE dbSUPER 0.1 -134.4 -134448 9.3 ZNF169 CEBPB TFEC ENSG00000199224 GC07M115834 GC07P116118
GH07I116096 Enhancer 1 Ensembl ENCODE 0.1 -264.1 -264117 1.5 ELF3 ATF1 FEZF1 ZBTB40 ZSCAN5C FOS YY2 ELF1 SMARCA4 MYC GC07P116118 TFEC GC07M115834 ENSG00000199224
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC07M115834 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC07M115834 Gene

Genomic Locations for GC07M115834 Gene
chr7:115,833,273-115,833,373
(GRCh38/hg38)
Size:
101 bases
Orientation:
Minus strand

Genomic View for GC07M115834 Gene

Genes around GC07M115834 on UCSC Golden Path with GeneCards custom track

GC07M115834 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07M115834 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07M115834 Gene

ORGUL Member Location for GC07M115834 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07M115834 Gene

Proteins for GC07M115834 Gene

Post-translational modifications for GC07M115834 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07M115834 Gene

Domains & Families for GC07M115834 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07M115834 Gene

Function for GC07M115834 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07M115834 Gene

Localization for GC07M115834 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07M115834 Gene

Pathways & Interactions for GC07M115834 Gene

SuperPathways for GC07M115834 Gene

No Data Available

Interacting Proteins for GC07M115834 Gene

Gene Ontology (GO) - Biological Process for GC07M115834 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07M115834 Gene

Drugs & Compounds for GC07M115834 Gene

No Compound Related Data Available

Transcripts for GC07M115834 Gene

fRNAdb Secondary structures for GC07M115834 Gene

  • FR072162
  • FR281631

Alternative Splicing Database (ASD) splice patterns (SP) for GC07M115834 Gene

No ASD Table

Relevant External Links for GC07M115834 Gene

GeneLoc Exon Structure for
GC07M115834

No data available for mRNA/cDNA for GC07M115834 Gene

Expression for GC07M115834 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07M115834 Gene

Orthologs for GC07M115834 Gene

No data available for Orthologs and Evolution for GC07M115834 Gene

Paralogs for GC07M115834 Gene

No data available for Paralogs for GC07M115834 Gene

Variants for GC07M115834 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC07M115834 Gene

Disorders for GC07M115834 Gene

No disorders were found for GC07M115834 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07M115834 Gene

Publications for GC07M115834 Gene

  1. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C … Chen R (Nucleic acids research 2005) 1
  2. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  3. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  4. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

Products for GC07M115834 Gene

Sources for GC07M115834 Gene

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