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Aliases for GC07M083820 Gene

Subcategory (RNA class) for GC07M083820 Gene

lncRNA

Quality Score for this RNA gene is

1

Aliases for GC07M083820 Gene

No Aliases found

ORGUL Members for GC07M083820 Gene

No data available for External Ids for GC07M083820 Gene

Summaries for GC07M083820 Gene

GeneCards Summary for GC07M083820 Gene

GC07M083820 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC07M083820 Gene

  • mature_transcript: A transcript which has undergone the necessary modifications, if any, for its function. In eukaryotes this includes, for example, processing of introns, cleavage, base modification, and modifications to the 5' and/or the 3' ends, other than addition of bases. In bacteria functional mRNAs are usually not modified.

Additional gene information for GC07M083820 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07M083820 Gene

Genomics for GC07M083820 Gene

GeneHancer (GH) Regulatory Elements for GC07M083820 Gene

Promoters and enhancers for GC07M083820 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I083677 Enhancer 0.9 ENCODE 0.1 +144.6 144623 0.8 PKNOX1 NEUROD1 FEZF1 GLIS2 KLF7 FOS KLF13 SP3 REST TSHZ1 SEMA3E RAD23BP2 GC07M083820
GH07I083684 Enhancer 0.7 ENCODE 0.1 +136.8 136760 0.9 NCOA3 ESRRA NEUROD1 BACH1 BMI1 CTBP1 GATA3 POLR2A RCOR1 FOS SEMA3E RAD23BP2 GC07M083820
GH07I083695 Enhancer 0.4 ENCODE 0.1 +126.5 126469 0.2 SP1 POU5F1 RAD23BP2 GC07M083820
GH07I083691 Enhancer 0.2 ENCODE 0.1 +130.7 130739 0.2 SEMA3E RAD23BP2 GC07M083820
GH07I083671 Enhancer 0.2 ENCODE 0.1 +149.8 149827 0.8 SEMA3E RAD23BP2 GC07M083820
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC07M083820 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC07M083820 Gene

Genomic Locations for GC07M083820 Gene
chr7:83,820,108-83,822,039
(GRCh38/hg38)
Size:
1,932 bases
Orientation:
Minus strand

Genomic View for GC07M083820 Gene

Genes around GC07M083820 on UCSC Golden Path with GeneCards custom track

GC07M083820 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07M083820 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC07M083820 Gene

Proteins for GC07M083820 Gene

Post-translational modifications for GC07M083820 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07M083820 Gene

Domains & Families for GC07M083820 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07M083820 Gene

Function for GC07M083820 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07M083820 Gene

Localization for GC07M083820 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07M083820 Gene

Pathways & Interactions for GC07M083820 Gene

SuperPathways for GC07M083820 Gene

No Data Available

Interacting Proteins for GC07M083820 Gene

Gene Ontology (GO) - Biological Process for GC07M083820 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07M083820 Gene

Drugs & Compounds for GC07M083820 Gene

No Compound Related Data Available

Transcripts for GC07M083820 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC07M083820 Gene

No ASD Table

Relevant External Links for GC07M083820 Gene

GeneLoc Exon Structure for
GC07M083820

No data available for mRNA/cDNA for GC07M083820 Gene

Expression for GC07M083820 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07M083820 Gene

Orthologs for GC07M083820 Gene

No data available for Orthologs and Evolution for GC07M083820 Gene

Paralogs for GC07M083820 Gene

No data available for Paralogs for GC07M083820 Gene

Variants for GC07M083820 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC07M083820 Gene

Disorders for GC07M083820 Gene

No disorders were found for GC07M083820 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07M083820 Gene

Publications for GC07M083820 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. Identification and characterization of human non-coding RNAs with tissue-specific expression. (PMID: 17451645) Sasaki YT … Hirose T (Biochemical and biophysical research communications 2007) 1
  3. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC07M083820 Gene

Sources for GC07M083820 Gene

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