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Aliases for GC07M069848 Gene

Subcategory (RNA class) for GC07M069848 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for GC07M069848 Gene

No Aliases found

ORGUL Members for GC07M069848 Gene

No data available for External Ids for GC07M069848 Gene

Summaries for GC07M069848 Gene

GeneCards Summary for GC07M069848 Gene

GC07M069848 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC07M069848 Gene

  • mature_transcript: A transcript which has undergone the necessary modifications, if any, for its function. In eukaryotes this includes, for example, processing of introns, cleavage, base modification, and modifications to the 5' and/or the 3' ends, other than addition of bases. In bacteria functional mRNAs are usually not modified.

Additional gene information for GC07M069848 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07M069848 Gene

Genomics for GC07M069848 Gene

GeneHancer (GH) Regulatory Elements for GC07M069848 Gene

Promoters and enhancers for GC07M069848 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I070104 Enhancer 0.7 UCNEbase 550.8 -1.8 -1802 0.3 POLR2A FOXP2 RCOR1 CHD2 GC07M069848 GC07M069900 GC07M070051 AUTS2
GH07I070098 Enhancer 1 UCNEbase 0.8 +4.4 4437 0.3 PKNOX1 INSM2 MZF1 FEZF1 ZNF213 ZNF366 SCRT2 KLF7 ZNF391 OVOL3 GC07M069848 GC07M069900 PIR55983 GC07M070051 AUTS2
GH07I070092 Enhancer 1.2 Ensembl ENCODE 0.4 +9.4 9415 2.4 PKNOX1 ARNT FEZF1 ZNF48 ZNF2 ZNF121 GLIS2 ZNF213 KLF7 FOS GC07M069848 PIR55983 GC07M069900 GC07M070051 AUTS2
GH07I070071 Enhancer 1.1 UCNEbase Ensembl ENCODE 0.3 +30.5 30542 1.6 PRDM6 RXRA POLR2A HNF4A NR2F2 PIR55983 GC07M069848 GC07M069900 GC07M070051 AUTS2
GH07I070062 Enhancer 0.6 ENCODE 0.3 +39.8 39780 0.8 SRF PKNOX1 MZF1 FEZF1 ZBTB8A ZNF843 OSR2 HIC1 PRDM6 ZBTB48 PIR55983 GC07M069848 GC07M069900 GC07M069849 GC07M070051 AUTS2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC07M069848 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC07M069848 Gene

Genomic Locations for GC07M069848 Gene
chr7:69,848,050-70,102,726
(GRCh38/hg38)
Size:
254,677 bases
Orientation:
Minus strand

Genomic View for GC07M069848 Gene

Genes around GC07M069848 on UCSC Golden Path with GeneCards custom track

GC07M069848 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07M069848 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC07M069848 Gene

Proteins for GC07M069848 Gene

Post-translational modifications for GC07M069848 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07M069848 Gene

Domains & Families for GC07M069848 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07M069848 Gene

Function for GC07M069848 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07M069848 Gene

Localization for GC07M069848 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07M069848 Gene

Pathways & Interactions for GC07M069848 Gene

SuperPathways for GC07M069848 Gene

No Data Available

Interacting Proteins for GC07M069848 Gene

Gene Ontology (GO) - Biological Process for GC07M069848 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07M069848 Gene

Drugs & Compounds for GC07M069848 Gene

No Compound Related Data Available

Transcripts for GC07M069848 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC07M069848 Gene

No ASD Table

Relevant External Links for GC07M069848 Gene

GeneLoc Exon Structure for
GC07M069848

No data available for mRNA/cDNA for GC07M069848 Gene

Expression for GC07M069848 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07M069848 Gene

Orthologs for GC07M069848 Gene

No data available for Orthologs and Evolution for GC07M069848 Gene

Paralogs for GC07M069848 Gene

No data available for Paralogs for GC07M069848 Gene

Variants for GC07M069848 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC07M069848 Gene

Disorders for GC07M069848 Gene

No disorders were found for GC07M069848 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07M069848 Gene

Publications for GC07M069848 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  2. Characterization of a common susceptibility locus for asthma-related traits. (PMID: 15073379) Laitinen T … Kere J (Science (New York, N.Y.) 2004) 1

Products for GC07M069848 Gene

Sources for GC07M069848 Gene

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