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Aliases for GC07M028118 Gene

Subcategory (RNA class) for GC07M028118 Gene


Quality Score for this RNA gene is


Aliases for GC07M028118 Gene

No Aliases found

ORGUL Members for GC07M028118 Gene

No data available for External Ids for GC07M028118 Gene

Summaries for GC07M028118 Gene

GeneCards Summary for GC07M028118 Gene

GC07M028118 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC07M028118 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

Additional gene information for GC07M028118 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07M028118 Gene

Genomics for GC07M028118 Gene

GeneHancer (GH) Regulatory Elements for GC07M028118 Gene

Promoters and enhancers for GC07M028118 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I028154 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -37.7 -37678 3.4 PKNOX1 FOXA2 BMI1 BATF KLF5 IRF4 RAD21 ZBTB40 RFX5 YY1 JAZF1 JAZF1-AS1 GC07M028118 RNU6-979P
GH07I028151 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -34.2 -34176 2.2 JUN BMI1 BATF KLF5 IRF4 ATF7 ETV6 IKZF2 RUNX3 SRF JAZF1 JAZF1-AS1 GC07M028118 RNU6-979P
GH07I028102 Enhancer 1 Ensembl ENCODE 0.4 +12.8 12839 6.7 RAD21 BRCA1 RARA SMARCC2 RCOR1 FOS DEK SMARCC1 OVOL3 CEBPB JAZF1-AS1 JAZF1 GC07M028118 RNU6-979P GC07P028093
GH07I028178 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 0.2 -61.8 -61832 2.7 MXI1 SIN3A BATF ZIC2 IRF4 ZNF335 GLIS2 ZBTB48 POLR2A VEZF1 JAZF1-AS1 JAZF1 RNU6-979P GC07M028118
GH07I028125 Enhancer 0.7 ENCODE 0.4 -8.2 -8234 2.3 ATF1 ETV1 CEBPG IRF9 CTBP1 TRIM24 CREM CEBPB EP300 SP1 JAZF1-AS1 RNU6-979P GC07M028118 GC07P028093 JAZF1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC07M028118 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC07M028118 Gene

Genomic Locations for GC07M028118 Gene
108 bases
Minus strand

Genomic View for GC07M028118 Gene

Genes around GC07M028118 on UCSC Golden Path with GeneCards custom track

GC07M028118 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07M028118 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC07M028118 Gene

Proteins for GC07M028118 Gene

Post-translational modifications for GC07M028118 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07M028118 Gene

Domains & Families for GC07M028118 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07M028118 Gene

Function for GC07M028118 Gene

Phenotypes From GWAS Catalog for GC07M028118 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07M028118 Gene

Localization for GC07M028118 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07M028118 Gene

Pathways & Interactions for GC07M028118 Gene

SuperPathways for GC07M028118 Gene

No Data Available

Interacting Proteins for GC07M028118 Gene

Gene Ontology (GO) - Biological Process for GC07M028118 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC07M028118 Gene

Drugs & Compounds for GC07M028118 Gene

No Compound Related Data Available

Transcripts for GC07M028118 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC07M028118 Gene

No ASD Table

Relevant External Links for GC07M028118 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC07M028118 Gene

Expression for GC07M028118 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07M028118 Gene

Orthologs for GC07M028118 Gene

No data available for Orthologs and Evolution for GC07M028118 Gene

Paralogs for GC07M028118 Gene

No data available for Paralogs for GC07M028118 Gene

Variants for GC07M028118 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC07M028118 Gene

Disorders for GC07M028118 Gene

No disorders were found for GC07M028118 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07M028118 Gene

Publications for GC07M028118 Gene

  1. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C … Chen R (Nucleic acids research 2005) 1
  2. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  3. The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functions. (PMID: 8797828) Balakin AG … Fournier MJ (Cell 1996) 1
  4. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H … Engberg J (Journal of molecular biology 1991) 1
  5. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

Products for GC07M028118 Gene

Sources for GC07M028118 Gene

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