Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC06P157399 Gene

Subcategory (RNA class) for GC06P157399 Gene

lncRNA

Quality Score for this RNA gene is

6

Aliases for GC06P157399 Gene

No Aliases found

No data available for External Ids for GC06P157399 Gene

Summaries for GC06P157399 Gene

GeneCards Summary for GC06P157399 Gene

GC06P157399 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC06P157399 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

View fRNAdb secondary structures for GC06P157399

Additional gene information for GC06P157399 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC06P157399 Gene

Genomics for GC06P157399 Gene

GeneHancer (GH) Regulatory Elements for GC06P157399 Gene

Promoters and enhancers for GC06P157399 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I157379 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.4 -17.9 -17921 3.5 HDGF MLX ARNT ZFP64 ARID4B SIN3A FEZF1 ZNF2 SLC30A9 POLR2B ZDHHC14 LOC100420839 GC06P157399 GC06P157400
GH06I157392 Enhancer 1.2 Ensembl ENCODE 0.4 -5.4 -5354 2.7 HDGF ATF1 ZNF48 TCF12 ZNF766 CBX5 GATA2 ATF7 NCOA1 ZNF592 TMEM242 SYNJ2 GC06P157399 GC06P157400 ZDHHC14
GH06I157434 Enhancer 1.1 Ensembl ENCODE 0.3 +35.8 35750 1.3 ELF3 PKNOX1 FOXA2 ARID4B THRB ZNF48 ZSCAN9 RAD21 RARA YY1 GC06P157399 GC06P157400 ZDHHC14 MIR3692
GH06I157428 Enhancer 1 Ensembl ENCODE 0.3 +29.8 29787 0.7 HDAC1 PKNOX1 ARNT EGR1 FOS CREM ZBTB2 REST GATAD2B ZEB2 GC06P157399 GC06P157400 ZDHHC14 MIR3692
GH06I157460 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.2 +62.4 62422 2.7 HDGF PKNOX1 ATF1 FOXA2 SMAD1 ARNT YBX1 IRF4 TCF12 ZNF121 ZDHHC14 SNX9 GC06P157399 GC06P157400 MIR3692
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC06P157399 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC06P157399 Gene

Genomic Locations for GC06P157399 Gene
chr6:157,399,157-157,399,418
(GRCh38/hg38)
Size:
262 bases
Orientation:
Plus strand

Genomic View for GC06P157399 Gene

Genes around GC06P157399 on UCSC Golden Path with GeneCards custom track

GC06P157399 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06P157399 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC06P157399 Gene

ORGUL Member Location for GC06P157399 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC06P157399 Gene

Proteins for GC06P157399 Gene

Post-translational modifications for GC06P157399 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06P157399 Gene

Domains & Families for GC06P157399 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06P157399 Gene

Function for GC06P157399 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06P157399 Gene

Localization for GC06P157399 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06P157399 Gene

Pathways & Interactions for GC06P157399 Gene

SuperPathways for GC06P157399 Gene

No Data Available

Interacting Proteins for GC06P157399 Gene

Gene Ontology (GO) - Biological Process for GC06P157399 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06P157399 Gene

Drugs & Compounds for GC06P157399 Gene

No Compound Related Data Available

Transcripts for GC06P157399 Gene

fRNAdb Secondary structures for GC06P157399 Gene

  • FR185740

Alternative Splicing Database (ASD) splice patterns (SP) for GC06P157399 Gene

No ASD Table

Relevant External Links for GC06P157399 Gene

GeneLoc Exon Structure for
GC06P157399

No data available for mRNA/cDNA for GC06P157399 Gene

Expression for GC06P157399 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06P157399 Gene

Orthologs for GC06P157399 Gene

No data available for Orthologs and Evolution for GC06P157399 Gene

Paralogs for GC06P157399 Gene

No data available for Paralogs for GC06P157399 Gene

Variants for GC06P157399 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC06P157399 Gene

Disorders for GC06P157399 Gene

No disorders were found for GC06P157399 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06P157399 Gene

Publications for GC06P157399 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC06P157399 Gene

Sources for GC06P157399 Gene

Content
Loading form....