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Aliases for GC06P111586 Gene

Subcategory (RNA class) for GC06P111586 Gene


Quality Score for this RNA gene is


Aliases for GC06P111586 Gene

No Aliases found

ORGUL Members for GC06P111586 Gene

No data available for External Ids for GC06P111586 Gene

Summaries for GC06P111586 Gene

GeneCards Summary for GC06P111586 Gene

GC06P111586 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC06P111586 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC06P111586

Additional gene information for GC06P111586 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC06P111586 Gene

Genomics for GC06P111586 Gene

GeneHancer (GH) Regulatory Elements for GC06P111586 Gene

Promoters and enhancers for GC06P111586 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I111584 Enhancer 1.1 Ensembl ENCODE dbSUPER 550.8 -0.6 -618 2.8 FOXA2 ZNF680 MAX CEBPB CEBPG RAD21 YY1 ZNF664 ZFHX2 GATA3 GC06P111586 TRAF3IP2 REV3L TRAF3IP2-AS1 ENSG00000255389 GC06M111521
GH06I111563 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -19.6 -19647 6.3 PKNOX1 SIN3A FEZF1 ZNF2 ZNF213 ZNF416 ZNF143 FOS ZNF662 REST TRAF3IP2 MFSD4B ENSG00000220506 REV3L BRD7P4 FCF1P5 ENSG00000255389 TRAF3IP2-AS1 TUBE1 ENSG00000272356
GH06I111582 Enhancer 0.8 FANTOM5 dbSUPER 0.8 -4.7 -4652 0.1 CTCF CEBPB MAX REST RAD21 HMBOX1 PRDM10 MYC REV3L TRAF3IP2 TRAF3IP2-AS1 GC06P111586 GC06M111521
GH06I111587 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 +5.6 5635 7.6 FOXA2 FEZF1 ZNF2 YY1 ZNF213 FOS DEK REST ZNF592 PPARGC1A ENSG00000255389 TRAF3IP2 REV3L TRAF3IP2-AS1 MFSD4B GC06P111602 GC06P111586
GH06I111572 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -11.6 -11612 4.8 MLX ARID4B FEZF1 DMAP1 ZNF48 ATF7 FOS RUNX3 NFYC ZHX2 ENSG00000255389 TRAF3IP2 REV3L TRAF3IP2-AS1 TUBE1 MFSD4B GC06P111586 GC06M111521
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC06P111586 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC06P111586 Gene

Genomic Locations for GC06P111586 Gene
159 bases
Plus strand

Genomic View for GC06P111586 Gene

Genes around GC06P111586 on UCSC Golden Path with GeneCards custom track

GC06P111586 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06P111586 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC06P111586 Gene

ORGUL Member Location for GC06P111586 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC06P111586 Gene

Proteins for GC06P111586 Gene

Post-translational modifications for GC06P111586 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06P111586 Gene

Domains & Families for GC06P111586 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06P111586 Gene

Function for GC06P111586 Gene

Phenotypes From GWAS Catalog for GC06P111586 Gene

Animal Model Products

miRNA for GC06P111586 Gene

miRTarBase miRNAs that target GC06P111586

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC06P111586 Gene

Localization for GC06P111586 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06P111586 Gene

Pathways & Interactions for GC06P111586 Gene

SuperPathways for GC06P111586 Gene

No Data Available

Interacting Proteins for GC06P111586 Gene

Gene Ontology (GO) - Biological Process for GC06P111586 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC06P111586 Gene

Drugs & Compounds for GC06P111586 Gene

No Compound Related Data Available

Transcripts for GC06P111586 Gene

fRNAdb Secondary structures for GC06P111586 Gene

  • FR085886
  • FR104372

Alternative Splicing Database (ASD) splice patterns (SP) for GC06P111586 Gene

No ASD Table

Relevant External Links for GC06P111586 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC06P111586 Gene

Expression for GC06P111586 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06P111586 Gene

Orthologs for GC06P111586 Gene

No data available for Orthologs and Evolution for GC06P111586 Gene

Paralogs for GC06P111586 Gene

No data available for Paralogs for GC06P111586 Gene

Variants for GC06P111586 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC06P111586 Gene

Disorders for GC06P111586 Gene

No disorders were found for GC06P111586 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06P111586 Gene

Publications for GC06P111586 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC06P111586 Gene

Sources for GC06P111586 Gene

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