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Aliases for GC06P052479 Gene

Subcategory (RNA class) for GC06P052479 Gene

lncRNA

Quality Score for this RNA gene is

12

Aliases for GC06P052479 Gene

No Aliases found

ORGUL Members for GC06P052479 Gene

No data available for External Ids for GC06P052479 Gene

Summaries for GC06P052479 Gene

GeneCards Summary for GC06P052479 Gene

GC06P052479 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC06P052479 Gene

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

Additional gene information for GC06P052479 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC06P052479 Gene

Genomics for GC06P052479 Gene

GeneHancer (GH) Regulatory Elements for GC06P052479 Gene

Promoters and enhancers for GC06P052479 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I052482 Enhancer 1 ENCODE 0.8 +3.4 3395 1.4 HDGF PKNOX1 FOXA2 ARNT FEZF1 ZNF2 ZNF213 FOS KLF13 SP3 EFHC1 MCM3 TRAM2 GC06P052479 PIR60379
GH06I052490 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +12.7 12681 4 MAX RBBP5 BATF RAD21 YY1 RELA POLR2A HNF4G ATF7 ETV6 MCM3 EFHC1 PAQR8 PIR60379 GC06P052479
GH06I052495 Enhancer 0.7 ENCODE dbSUPER 0.4 +16.2 16232 0.2 CTCF ZFHX2 ZNF654 EBF1 BATF RAD21 EGR2 PIR60379 PIR60436 GC06P052479 EFHC1
GH06I052456 Enhancer 0.5 ENCODE 0.3 -22.6 -22597 0.8 NFIL3 HLF ZBTB33 RARA EZH2 EFHC1 PIR35463 GC06P052479
GH06I052489 Enhancer 0.3 dbSUPER 0.4 +10.1 10116 0.4 JUN EFHC1 PIR60379 GC06P052479
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC06P052479 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC06P052479 Gene

Genomic Locations for GC06P052479 Gene
chr6:52,479,806-52,483,016
(GRCh38/hg38)
Size:
3,211 bases
Orientation:
Plus strand

Genomic View for GC06P052479 Gene

Genes around GC06P052479 on UCSC Golden Path with GeneCards custom track

GC06P052479 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06P052479 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC06P052479 Gene

Proteins for GC06P052479 Gene

Post-translational modifications for GC06P052479 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06P052479 Gene

Domains & Families for GC06P052479 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06P052479 Gene

Function for GC06P052479 Gene

Animal Model Products

miRNA for GC06P052479 Gene

miRTarBase miRNAs that target GC06P052479

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC06P052479 Gene

Localization for GC06P052479 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06P052479 Gene

Pathways & Interactions for GC06P052479 Gene

SuperPathways for GC06P052479 Gene

No Data Available

Interacting Proteins for GC06P052479 Gene

Gene Ontology (GO) - Biological Process for GC06P052479 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06P052479 Gene

Drugs & Compounds for GC06P052479 Gene

No Compound Related Data Available

Transcripts for GC06P052479 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC06P052479 Gene

No ASD Table

Relevant External Links for GC06P052479 Gene

GeneLoc Exon Structure for
GC06P052479

No data available for mRNA/cDNA for GC06P052479 Gene

Expression for GC06P052479 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06P052479 Gene

Orthologs for GC06P052479 Gene

No data available for Orthologs and Evolution for GC06P052479 Gene

Paralogs for GC06P052479 Gene

No data available for Paralogs for GC06P052479 Gene

Variants for GC06P052479 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC06P052479 Gene

Disorders for GC06P052479 Gene

No disorders were found for GC06P052479 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06P052479 Gene

Publications for GC06P052479 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC06P052479 Gene

Sources for GC06P052479 Gene

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