Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC06P042664 Gene

Subcategory (RNA class) for GC06P042664 Gene


Quality Score for this RNA gene is


Aliases for GC06P042664 Gene

No Aliases found

ORGUL Members for GC06P042664 Gene

No data available for External Ids for GC06P042664 Gene

Summaries for GC06P042664 Gene

GeneCards Summary for GC06P042664 Gene

GC06P042664 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC06P042664 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

Additional gene information for GC06P042664 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC06P042664 Gene

Genomics for GC06P042664 Gene

GeneHancer (GH) Regulatory Elements for GC06P042664 Gene

Promoters and enhancers for GC06P042664 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I042661 Enhancer 0.7 ENCODE 0.8 -2.4 -2403 0.2 CTCF RB1 MZF1 ZNF384 ZNF2 ZSCAN9 RAD21 RFX5 RFXANK SMC3 GC06P042664 UBR2
GH06I042563 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.2 -99.1 -99138 3.4 FEZF1 DMAP1 IRF4 YY1 SLC30A9 E2F8 ZNF143 SP3 NFYC MEF2D UBR2 PRPH2 ENSG00000271970 POLR1C FRS3 RNU6-890P PTK7 RPS2P29 ENSG00000271754 GC06P042664
GH06I042568 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.2 -94.5 -94490 1.9 HDGF HDAC1 ATF1 PKNOX1 FOXA2 TAF9B ARNT NFXL1 ZBTB40 CHAMP1 UBR2 PRPH2 ZNF318 CUL7 ABCC10 RPL24P4 RNU6-890P MED20 RPS2P29 BICRAL
GH06I042660 Enhancer 0.3 FANTOM5 0.8 -3.0 -3006 0.4 CTCF UBR2 GC06P042664
GH06I042571 Enhancer 0.9 Ensembl ENCODE 0.2 -91.7 -91686 2 HDGF IRF4 ATF7 ETV6 BCLAF1 IKZF2 RUNX3 SMARCE1 ZNF362 ZNF687 PRPH2 RNU6-890P UBR2 GC06P042664
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC06P042664 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC06P042664 Gene

Genomic Locations for GC06P042664 Gene
108 bases
Plus strand

Genomic View for GC06P042664 Gene

Genes around GC06P042664 on UCSC Golden Path with GeneCards custom track

GC06P042664 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06P042664 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC06P042664 Gene

Proteins for GC06P042664 Gene

Post-translational modifications for GC06P042664 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06P042664 Gene

Domains & Families for GC06P042664 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06P042664 Gene

Function for GC06P042664 Gene

Animal Model Products

miRNA for GC06P042664 Gene

miRTarBase miRNAs that target GC06P042664

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC06P042664 Gene

Localization for GC06P042664 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06P042664 Gene

Pathways & Interactions for GC06P042664 Gene

SuperPathways for GC06P042664 Gene

No Data Available

Interacting Proteins for GC06P042664 Gene

Gene Ontology (GO) - Biological Process for GC06P042664 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC06P042664 Gene

Drugs & Compounds for GC06P042664 Gene

No Compound Related Data Available

Transcripts for GC06P042664 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC06P042664 Gene

No ASD Table

Relevant External Links for GC06P042664 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC06P042664 Gene

Expression for GC06P042664 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06P042664 Gene

Orthologs for GC06P042664 Gene

No data available for Orthologs and Evolution for GC06P042664 Gene

Paralogs for GC06P042664 Gene

No data available for Paralogs for GC06P042664 Gene

Variants for GC06P042664 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC06P042664 Gene

Disorders for GC06P042664 Gene

No disorders were found for GC06P042664 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06P042664 Gene

Publications for GC06P042664 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H … Engberg J (Journal of molecular biology 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

Products for GC06P042664 Gene

Sources for GC06P042664 Gene

Loading form....