Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC06P042499 Gene

Subcategory (RNA class) for GC06P042499 Gene

lncRNA

Quality Score for this RNA gene is

10

Aliases for GC06P042499 Gene

No Aliases found

ORGUL Members for GC06P042499 Gene

No data available for External Ids for GC06P042499 Gene

Summaries for GC06P042499 Gene

GeneCards Summary for GC06P042499 Gene

GC06P042499 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC06P042499 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC06P042499 Gene

Genomics for GC06P042499 Gene

GeneHancer (GH) Regulatory Elements for GC06P042499 Gene

Promoters and enhancers for GC06P042499 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I042505 Enhancer 0.9 Ensembl ENCODE 0.4 +6.2 6173 1.4 HDGF KLF1 JUN CHD4 FOSL1 POLR2A ATF7 PRDM10 USF2 JUNB PRPH2 GC06P042499 UBR2
GH06I042520 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.3 +21.3 21251 1.4 HDAC1 MEIS2 PKNOX1 JUN EBF1 FOSL1 GATA3 ZNF766 NFATC1 ETV6 PRPH2 CNPY3 GC06P042499 UBR2
GH06I042547 Enhancer 1.5 FANTOM5 Ensembl ENCODE 0.2 +48.1 48084 1.6 PKNOX1 CLOCK ARNT ARID4B SIN3A ZNF2 IRF4 SLC30A9 ZNF213 E2F8 GUCA1A ABCC10 CUL7 RPL34P14 PRPH2 PEX6 ZNF318 BICRAL ENSG00000272223 MEA1
GH06I042532 Enhancer 0.7 ENCODE 0.3 +32.5 32528 0.2 HDAC1 CTCF ESRRA RAD21 RFX5 ZNF143 SMC3 RCOR1 ZNF444 PHF21A UBR2 GC06P042499
GH06I042556 Enhancer 0.8 ENCODE 0.2 +56.3 56336 2.7 INSM2 KLF17 MZF1 ZNF2 RFX5 CHAMP1 ZNF335 ZSCAN5C FOS ZNF362 PRPH2 RNU6-890P UBR2 GC06P042499
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC06P042499 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC06P042499 Gene

Genomic Locations for GC06P042499 Gene
chr6:42,499,710-42,500,022
(GRCh38/hg38)
Size:
313 bases
Orientation:
Plus strand

Genomic View for GC06P042499 Gene

Genes around GC06P042499 on UCSC Golden Path with GeneCards custom track

GC06P042499 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06P042499 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC06P042499 Gene

Proteins for GC06P042499 Gene

Post-translational modifications for GC06P042499 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06P042499 Gene

Domains & Families for GC06P042499 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06P042499 Gene

Function for GC06P042499 Gene

Phenotypes From GWAS Catalog for GC06P042499 Gene

Animal Model Products

miRNA for GC06P042499 Gene

miRTarBase miRNAs that target GC06P042499

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC06P042499 Gene

Localization for GC06P042499 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06P042499 Gene

Pathways & Interactions for GC06P042499 Gene

SuperPathways for GC06P042499 Gene

No Data Available

Interacting Proteins for GC06P042499 Gene

Gene Ontology (GO) - Biological Process for GC06P042499 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06P042499 Gene

Drugs & Compounds for GC06P042499 Gene

No Compound Related Data Available

Transcripts for GC06P042499 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC06P042499 Gene

No ASD Table

Relevant External Links for GC06P042499 Gene

GeneLoc Exon Structure for
GC06P042499

No data available for mRNA/cDNA for GC06P042499 Gene

Expression for GC06P042499 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06P042499 Gene

Orthologs for GC06P042499 Gene

No data available for Orthologs and Evolution for GC06P042499 Gene

Paralogs for GC06P042499 Gene

No data available for Paralogs for GC06P042499 Gene

Variants for GC06P042499 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC06P042499 Gene

Disorders for GC06P042499 Gene

No disorders were found for GC06P042499 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06P042499 Gene

Publications for GC06P042499 Gene

No publications were found for GC06P042499 Gene.

Products for GC06P042499 Gene

Sources for GC06P042499 Gene

Content
Loading form....