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Aliases for GC06M089899 Gene

Subcategory (RNA class) for GC06M089899 Gene

Y RNA

Quality Score for this RNA gene is

15

Aliases for GC06M089899 Gene

No Aliases found

ORGUL Members for GC06M089899 Gene

No data available for External Ids for GC06M089899 Gene

Summaries for GC06M089899 Gene

GeneCards Summary for GC06M089899 Gene

GC06M089899 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC06M089899 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC06M089899 Gene

Genomics for GC06M089899 Gene

GeneHancer (GH) Regulatory Elements for GC06M089899 Gene

Promoters and enhancers for GC06M089899 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J089940 Enhancer 1 Ensembl ENCODE 0.3 -42.2 -42209 0.4 ELF3 FOXA2 ARID4B ZNF2 RAD21 RFX5 ZNF614 ZNF143 CREM DEK PIR53362 GC06M089899 ENSG00000252891 BACH2
GH06J089927 Enhancer 0.4 Ensembl 0.3 -29.7 -29676 0.9 JUN CEBPB SPI1 ENSG00000226455 ENSG00000252891 GJA10 CASP8AP2 MDN1 PIR53362 GC06M089899 BACH2
GH06J089925 Enhancer 0.3 ENCODE 0.3 -27.6 -27585 0.2 CEBPB ENSG00000226455 ENSG00000252891 GJA10 PIR53362 GC06M089899 GC06P089882
GH06J089910 Enhancer 0.2 Ensembl 0.4 -12.2 -12209 0.4 ENSG00000226455 GC06M089899 ENSG00000252891 GJA10 GC06P089882 PIR53362
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC06M089899 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC06M089899 Gene

Genomic Locations for GC06M089899 Gene
chr6:89,898,288-89,898,392
(GRCh38/hg38)
Size:
105 bases
Orientation:
Minus strand

Genomic View for GC06M089899 Gene

Genes around GC06M089899 on UCSC Golden Path with GeneCards custom track

GC06M089899 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06M089899 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC06M089899 Gene

Proteins for GC06M089899 Gene

Post-translational modifications for GC06M089899 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06M089899 Gene

Domains & Families for GC06M089899 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06M089899 Gene

Function for GC06M089899 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06M089899 Gene

Localization for GC06M089899 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06M089899 Gene

Pathways & Interactions for GC06M089899 Gene

SuperPathways for GC06M089899 Gene

No Data Available

Interacting Proteins for GC06M089899 Gene

Gene Ontology (GO) - Biological Process for GC06M089899 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06M089899 Gene

Drugs & Compounds for GC06M089899 Gene

No Compound Related Data Available

Transcripts for GC06M089899 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC06M089899 Gene

No ASD Table

Relevant External Links for GC06M089899 Gene

GeneLoc Exon Structure for
GC06M089899

No data available for mRNA/cDNA for GC06M089899 Gene

Expression for GC06M089899 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06M089899 Gene

Orthologs for GC06M089899 Gene

No data available for Orthologs and Evolution for GC06M089899 Gene

Paralogs for GC06M089899 Gene

No data available for Paralogs for GC06M089899 Gene

Variants for GC06M089899 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC06M089899 Gene

Disorders for GC06M089899 Gene

No disorders were found for GC06M089899 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06M089899 Gene

Publications for GC06M089899 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

Products for GC06M089899 Gene

Sources for GC06M089899 Gene

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