Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC06M052308 Gene

Subcategory (RNA class) for GC06M052308 Gene

antisense

Quality Score for this RNA gene is

2

Aliases for GC06M052308 Gene

No Aliases found

ORGUL Members for GC06M052308 Gene

No data available for External Ids for GC06M052308 Gene

Summaries for GC06M052308 Gene

GeneCards Summary for GC06M052308 Gene

GC06M052308 is an RNA Gene, and is affiliated with the antisense RNA class.

fRNAdb sequence ontologies for GC06M052308 Gene

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

Additional gene information for GC06M052308 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC06M052308 Gene

Genomics for GC06M052308 Gene

GeneHancer (GH) Regulatory Elements for GC06M052308 Gene

Promoters and enhancers for GC06M052308 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I052312 Enhancer 0.4 ENCODE 550.8 +0.9 887 0.2 SOX5 EMSY GC06M052308 MCM3 GC06P052310
GH06I052302 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +7.7 7660 5.9 PKNOX1 FOXA2 ARNT DMAP1 IRF4 ZNF48 NCOA2 TCF12 ATF7 RUNX3 GC06P052308 GC06M052308 MCM3
GH06I052325 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -15.3 -15314 6.9 ATF1 PKNOX1 FOXA2 MLX ARID4B DMAP1 ZNF48 SLC30A9 ATF7 PAF1 PAQR8 MCM3 TRAM2 LOC730101 GC06M052308
GH06I052351 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -39.0 -39013 2.3 HDGF SMAD1 FOXA2 ARNT ARID4B ZNF2 IRF4 SLC30A9 FOS DEK MCM3 PAQR8 EFHC1 GC06M052308
GH06I052317 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -5.0 -5040 1.7 EBF1 CEBPG BATF IRF4 TEAD3 FOSL1 ZNF121 ZNF143 RCOR1 ATF7 PAQR8 MCM3 MIR133B LINCMD1 GC06M052308
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC06M052308 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC06M052308 Gene

Genomic Locations for GC06M052308 Gene
chr6:52,308,238-52,313,525
(GRCh38/hg38)
Size:
5,288 bases
Orientation:
Minus strand

Genomic View for GC06M052308 Gene

Genes around GC06M052308 on UCSC Golden Path with GeneCards custom track

GC06M052308 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06M052308 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC06M052308 Gene

ORGUL Member Location for GC06M052308 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC06M052308 Gene

Proteins for GC06M052308 Gene

Post-translational modifications for GC06M052308 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06M052308 Gene

Domains & Families for GC06M052308 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06M052308 Gene

Function for GC06M052308 Gene

Phenotypes From GWAS Catalog for GC06M052308 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06M052308 Gene

Localization for GC06M052308 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06M052308 Gene

Pathways & Interactions for GC06M052308 Gene

SuperPathways for GC06M052308 Gene

No Data Available

Interacting Proteins for GC06M052308 Gene

Gene Ontology (GO) - Biological Process for GC06M052308 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06M052308 Gene

Drugs & Compounds for GC06M052308 Gene

No Compound Related Data Available

Transcripts for GC06M052308 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC06M052308 Gene

No ASD Table

Relevant External Links for GC06M052308 Gene

GeneLoc Exon Structure for
GC06M052308

No data available for mRNA/cDNA for GC06M052308 Gene

Expression for GC06M052308 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06M052308 Gene

Orthologs for GC06M052308 Gene

No data available for Orthologs and Evolution for GC06M052308 Gene

Paralogs for GC06M052308 Gene

No data available for Paralogs for GC06M052308 Gene

Variants for GC06M052308 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC06M052308 Gene

Disorders for GC06M052308 Gene

No disorders were found for GC06M052308 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06M052308 Gene

Publications for GC06M052308 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC06M052308 Gene

Sources for GC06M052308 Gene

Content
Loading form....