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Aliases for GC06M041280 Gene

Subcategory (RNA class) for GC06M041280 Gene

lncRNA

Quality Score for this RNA gene is

0

Aliases for GC06M041280 Gene

No Aliases found

ORGUL Members for GC06M041280 Gene

No data available for External Ids for GC06M041280 Gene

Summaries for GC06M041280 Gene

GeneCards Summary for GC06M041280 Gene

GC06M041280 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC06M041280 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC06M041280 Gene

Genomics for GC06M041280 Gene

GeneHancer (GH) Regulatory Elements for GC06M041280 Gene

Promoters and enhancers for GC06M041280 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I041280 Enhancer 0.5 Ensembl dbSUPER 550.8 +1.2 1227 0.9 YBX1 GC06M041280 TREM1 ENSG00000218809
GH06I041284 Promoter/Enhancer 1.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.8 -3.8 -3836 3.8 CTCF RFX1 ETV1 HLF CEBPB CEBPG EP300 RFX5 GABPA POLR2A TREM1 TFEB NFYA TREML2 TREML4 GC06M041280
GH06I041278 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.8 +2.9 2866 0.8 HDGF ATF1 SMAD1 ARNT IRF4 NCOA2 TCF12 ZNF766 GATA2 E2F8 TREM1 USP49 NFYA TFEB TREML2 TREML4 GC06M041280 ENSG00000218809
GH06I041271 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +9.9 9907 2.3 CTCF POLR2A ZFP64 MAX CREB1 MYC ZKSCAN1 GABPA ENSG00000218809 TREM1 TREML4 NFYA TREML3P TFEB TREML2 TREML1 GC06M041280
GH06I041277 Enhancer 0.6 Ensembl dbSUPER 0.8 +4.4 4354 0.6 CTCF SPI1 TREM1 GC06M041280 ENSG00000218809
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC06M041280 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC06M041280 Gene

Genomic Locations for GC06M041280 Gene
chr6:41,280,191-41,282,066
(GRCh38/hg38)
Size:
1,876 bases
Orientation:
Minus strand

Genomic View for GC06M041280 Gene

Genes around GC06M041280 on UCSC Golden Path with GeneCards custom track

GC06M041280 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06M041280 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC06M041280 Gene

Proteins for GC06M041280 Gene

Post-translational modifications for GC06M041280 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06M041280 Gene

Domains & Families for GC06M041280 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06M041280 Gene

Function for GC06M041280 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06M041280 Gene

Localization for GC06M041280 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06M041280 Gene

Pathways & Interactions for GC06M041280 Gene

SuperPathways for GC06M041280 Gene

No Data Available

Interacting Proteins for GC06M041280 Gene

Gene Ontology (GO) - Biological Process for GC06M041280 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06M041280 Gene

Drugs & Compounds for GC06M041280 Gene

No Compound Related Data Available

Transcripts for GC06M041280 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC06M041280 Gene

No ASD Table

Relevant External Links for GC06M041280 Gene

GeneLoc Exon Structure for
GC06M041280

No data available for mRNA/cDNA for GC06M041280 Gene

Expression for GC06M041280 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06M041280 Gene

Orthologs for GC06M041280 Gene

No data available for Orthologs and Evolution for GC06M041280 Gene

Paralogs for GC06M041280 Gene

No data available for Paralogs for GC06M041280 Gene

Variants for GC06M041280 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC06M041280 Gene

Disorders for GC06M041280 Gene

No disorders were found for GC06M041280 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06M041280 Gene

Publications for GC06M041280 Gene

No publications were found for GC06M041280 Gene.

Products for GC06M041280 Gene

Sources for GC06M041280 Gene

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