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Aliases for GC06M038525 Gene

Subcategory (RNA class) for GC06M038525 Gene

SRP

Quality Score for this RNA gene is

15

Aliases for GC06M038525 Gene

No Aliases found

ORGUL Members for GC06M038525 Gene

No data available for External Ids for GC06M038525 Gene

Summaries for GC06M038525 Gene

GeneCards Summary for GC06M038525 Gene

GC06M038525 is an RNA Gene, and is affiliated with the SRP RNA class.

Additional gene information for GC06M038525 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC06M038525 Gene

Genomics for GC06M038525 Gene

GeneHancer (GH) Regulatory Elements for GC06M038525 Gene

Promoters and enhancers for GC06M038525 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J034683 Enhancer 0.6 dbSUPER 650.7 +1.1 1099 1.7 SOX13 FOXA2 CHAMP1 ZNF664 ZSCAN16 GLIS1 KDM1A MLLT1 ZBTB33 FOXP1 GC06M038525 RN7SL200P UHRF1BP1 C6orf106 GC06P043158
GH06J034679 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.7 +4.9 4861 2.1 HDGF PKNOX1 ARNT FOS ATF7 RUNX3 SP3 RXRA JUNB TSHZ1 UHRF1BP1 GC06M038525 RN7SL200P C6orf106 GC06P043158
GH06J034670 Enhancer 1.5 Ensembl ENCODE dbSUPER 0.4 +12.3 12334 6.3 HDGF PKNOX1 FOXA2 SMAD1 MLX ARNT ZFP64 ARID4B FEZF1 DMAP1 UHRF1BP1 SMIM29 GC06M038525 RN7SL200P C6orf106 GC06P043158
GH06J034655 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +28.2 28176 4 HDGF PKNOX1 FOXA2 MLX ARNT ZFP64 ARID4B FEZF1 DMAP1 ZNF2 UHRF1BP1 TAF11 LEMD2 ENSG00000220643 C6orf106 ENSG00000219023 FANCE RPS10 RPL10A HMGA1
GH06J034663 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +21.2 21184 3.4 HDGF PKNOX1 ATF1 FOXA2 ARNT ETS1 YY1 ZNF766 E2F8 ATF7 UHRF1BP1 ENSG00000220643 C6orf106 FANCE HMGA1 RN7SL200P GC06M038525 GC06P043158
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC06M038525 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC06M038525 Gene

Genomic Locations for GC06M038525 Gene
chr6:34,685,339-34,685,642
(GRCh38/hg38)
Size:
304 bases
Orientation:
Minus strand

Genomic View for GC06M038525 Gene

Genes around GC06M038525 on UCSC Golden Path with GeneCards custom track

GC06M038525 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06M038525 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC06M038525 Gene

Proteins for GC06M038525 Gene

Post-translational modifications for GC06M038525 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06M038525 Gene

Domains & Families for GC06M038525 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06M038525 Gene

Function for GC06M038525 Gene

Phenotypes From GWAS Catalog for GC06M038525 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06M038525 Gene

Localization for GC06M038525 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06M038525 Gene

Pathways & Interactions for GC06M038525 Gene

SuperPathways for GC06M038525 Gene

No Data Available

Interacting Proteins for GC06M038525 Gene

Gene Ontology (GO) - Biological Process for GC06M038525 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06M038525 Gene

Drugs & Compounds for GC06M038525 Gene

No Compound Related Data Available

Transcripts for GC06M038525 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC06M038525 Gene

No ASD Table

Relevant External Links for GC06M038525 Gene

GeneLoc Exon Structure for
GC06M038525

No data available for mRNA/cDNA for GC06M038525 Gene

Expression for GC06M038525 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06M038525 Gene

Orthologs for GC06M038525 Gene

No data available for Orthologs and Evolution for GC06M038525 Gene

Paralogs for GC06M038525 Gene

No data available for Paralogs for GC06M038525 Gene

Variants for GC06M038525 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC06M038525 Gene

Disorders for GC06M038525 Gene

No disorders were found for GC06M038525 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06M038525 Gene

Publications for GC06M038525 Gene

  1. SRPDB: Signal Recognition Particle Database. (PMID: 12520023) Rosenblad MA … Samuelsson T (Nucleic acids research 2003) 1
  2. Towards the structure of the mammalian signal recognition particle. (PMID: 11839493) Wild K … Cusack S (Current opinion in structural biology 2002) 1
  3. Prediction of signal recognition particle RNA genes. (PMID: 12140321) Regalia M … Samuelsson T (Nucleic acids research 2002) 1
  4. Structural and energetic analysis of RNA recognition by a universally conserved protein from the signal recognition particle. (PMID: 11243816) Batey RT … Doudna JA (Journal of molecular biology 2001) 1
  5. Crystal structure of the ribonucleoprotein core of the signal recognition particle. (PMID: 10678824) Batey RT … Doudna JA (Science (New York, N.Y.) 2000) 1

Products for GC06M038525 Gene

Sources for GC06M038525 Gene

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