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Aliases for GC06M031908 Gene

Subcategory (RNA class) for GC06M031908 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for GC06M031908 Gene

No Aliases found

No data available for External Ids for GC06M031908 Gene

Summaries for GC06M031908 Gene

GeneCards Summary for GC06M031908 Gene

GC06M031908 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC06M031908 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC06M031908 Gene

Genomics for GC06M031908 Gene

GeneHancer (GH) Regulatory Elements for GC06M031908 Gene

Promoters and enhancers for GC06M031908 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I031779 Enhancer 0.5 dbSUPER 550.8 -1.6 -1553 1.8 STAT1 POLR2A ZNF449 IKZF1 ZNF600 RELA EGR2 ENSG00000201555 GC06M031908 LY6G5C VARS
GH06I031792 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -16.8 -16790 6.7 DMAP1 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC MEF2D SSRP1 ZNF610 VARS2 VARS MSH5 SKIV2L C4A LSM2 ATF6B BAG6 LY6G5B HLA-DRB5
GH06I031791 Enhancer 1 ENCODE dbSUPER 0.4 -12.6 -12604 0.2 HDAC1 ELF3 HDGF PKNOX1 ARNT ARID4B KLF17 SIN3A RAD21 ZNF143 VARS GC06M031908 ENSG00000201555
GH06I031789 Enhancer 0.7 ENCODE 0.4 -10.7 -10652 0.5 HDGF PKNOX1 RB1 EBF1 NFXL1 BATF IRF4 RELA BCLAF1 IKZF2 VARS GC06M031908 ENSG00000201555
GH06I031785 Enhancer 0.4 dbSUPER 0.4 -6.7 -6659 0.9 STAT1 EGR2 LY6G5B LSM2 ENSG00000201555 GC06M031908 VARS
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC06M031908 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC06M031908 Gene

Genomic Locations for GC06M031908 Gene
chr6:31,778,818-31,778,905
(GRCh38/hg38)
Size:
88 bases
Orientation:
Minus strand

Genomic View for GC06M031908 Gene

Genes around GC06M031908 on UCSC Golden Path with GeneCards custom track

GC06M031908 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06M031908 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC06M031908 Gene

Proteins for GC06M031908 Gene

Post-translational modifications for GC06M031908 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06M031908 Gene

Domains & Families for GC06M031908 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06M031908 Gene

Function for GC06M031908 Gene

Phenotypes From GWAS Catalog for GC06M031908 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06M031908 Gene

Localization for GC06M031908 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06M031908 Gene

Pathways & Interactions for GC06M031908 Gene

SuperPathways for GC06M031908 Gene

No Data Available

Interacting Proteins for GC06M031908 Gene

Gene Ontology (GO) - Biological Process for GC06M031908 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06M031908 Gene

Drugs & Compounds for GC06M031908 Gene

No Compound Related Data Available

Transcripts for GC06M031908 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC06M031908 Gene

No ASD Table

Relevant External Links for GC06M031908 Gene

GeneLoc Exon Structure for
GC06M031908

No data available for mRNA/cDNA for GC06M031908 Gene

Expression for GC06M031908 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06M031908 Gene

Orthologs for GC06M031908 Gene

No data available for Orthologs and Evolution for GC06M031908 Gene

Paralogs for GC06M031908 Gene

No data available for Paralogs for GC06M031908 Gene

Variants for GC06M031908 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC06M031908 Gene

Disorders for GC06M031908 Gene

No disorders were found for GC06M031908 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06M031908 Gene

Publications for GC06M031908 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

Products for GC06M031908 Gene

Sources for GC06M031908 Gene

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