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Aliases for GC06M028907 Gene

Subcategory (RNA class) for GC06M028907 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for GC06M028907 Gene

No Aliases found

No data available for External Ids for GC06M028907 Gene

Summaries for GC06M028907 Gene

GeneCards Summary for GC06M028907 Gene

GC06M028907 is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for GC06M028907 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC06M028907 Gene

Genomics for GC06M028907 Gene

GeneHancer (GH) Regulatory Elements for GC06M028907 Gene

Promoters and enhancers for GC06M028907 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I028807 Enhancer 1.4 Ensembl ENCODE dbSUPER 550.8 -0.2 -192 1 HDGF PKNOX1 ARNT ARID4B FEZF1 ZNF2 ZNF213 E2F8 FOS KLF13 GC06M028907 TRF-GAA3-1 TRIM27 ZSCAN12 ZSCAN23 ZKSCAN8 ZFP57 ZSCAN9 SUMO2P1 LINC01556
GH06I028808 Enhancer 0.7 ENCODE dbSUPER 550.8 -0.8 -774 0.2 HDGF ZNF316 POLR2A GTF2E2 IKZF1 MLLT1 EZH2 GC06M028907 TRF-GAA3-1 ZFP57 GC06M028850 TRA-AGC6-1 GC06P028492
GH06I028802 Enhancer 1.5 Ensembl ENCODE dbSUPER 0.8 +4.8 4849 1.1 HDGF PKNOX1 ARNT SIN3A YBX1 ZNF2 ZNF766 ZNF213 ZNF302 E2F8 GC06M028901 GC06M028919 TRA-TGC7-1 ZSCAN12 ZKSCAN3 ZSCAN23 ZKSCAN8 PGBD1 ZKSCAN4 ZSCAN9
GH06I028810 Enhancer 1.1 ENCODE dbSUPER 0.8 -2.6 -2574 0.2 ARNT SIN3A ZNF2 ZNF48 NCOA1 ZNF184 NBN KDM1A WT1 SP7 GC06M028850 TRA-AGC6-1 PGBD1 ZSCAN23 ZSCAN26 ZSCAN12 ZSCAN31 GC06M028907 TRF-GAA3-1 GC06P028492
GH06I028811 Enhancer 1.1 ENCODE dbSUPER 0.8 -2.3 -2264 0.1 ARNT SIN3A ZNF2 ZNF48 ARID2 NCOA1 REST SMARCA4 ZNF184 NBN GC06M028850 TRA-AGC6-1 ZNF603P GC06M028907 TRF-GAA3-1 GC06P028492
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC06M028907 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC06M028907 Gene

Genomic Locations for GC06M028907 Gene
chr6:28,807,832-28,807,905
(GRCh38/hg38)
Size:
74 bases
Orientation:
Minus strand

Genomic View for GC06M028907 Gene

Genes around GC06M028907 on UCSC Golden Path with GeneCards custom track

GC06M028907 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06M028907 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC06M028907 Gene

Proteins for GC06M028907 Gene

Post-translational modifications for GC06M028907 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06M028907 Gene

Domains & Families for GC06M028907 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06M028907 Gene

Function for GC06M028907 Gene

Phenotypes From GWAS Catalog for GC06M028907 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06M028907 Gene

Localization for GC06M028907 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06M028907 Gene

Pathways & Interactions for GC06M028907 Gene

SuperPathways for GC06M028907 Gene

No Data Available

Interacting Proteins for GC06M028907 Gene

Gene Ontology (GO) - Biological Process for GC06M028907 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06M028907 Gene

Drugs & Compounds for GC06M028907 Gene

No Compound Related Data Available

Transcripts for GC06M028907 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC06M028907 Gene

No ASD Table

Relevant External Links for GC06M028907 Gene

GeneLoc Exon Structure for
GC06M028907

No data available for mRNA/cDNA for GC06M028907 Gene

Expression for GC06M028907 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06M028907 Gene

Orthologs for GC06M028907 Gene

No data available for Orthologs and Evolution for GC06M028907 Gene

Paralogs for GC06M028907 Gene

No data available for Paralogs for GC06M028907 Gene

Variants for GC06M028907 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC06M028907 Gene

Disorders for GC06M028907 Gene

No disorders were found for GC06M028907 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06M028907 Gene

Publications for GC06M028907 Gene

  1. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. (PMID: 9023104) Lowe TM … Eddy SR (Nucleic acids research 1997) 1
  2. The tertiary structure of tRNA and the development of the genetic code. (PMID: 8256282) Hou YM (Trends in biochemical sciences 1993) 1

Products for GC06M028907 Gene

Sources for GC06M028907 Gene

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