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Aliases for GC06M028798 Gene

Subcategory (RNA class) for GC06M028798 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for GC06M028798 Gene

No Aliases found

No data available for External Ids for GC06M028798 Gene

Summaries for GC06M028798 Gene

GeneCards Summary for GC06M028798 Gene

GC06M028798 is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for GC06M028798 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC06M028798 Gene

Genomics for GC06M028798 Gene

GeneHancer (GH) Regulatory Elements for GC06M028798 Gene

Promoters and enhancers for GC06M028798 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I028795 Enhancer 1.3 Ensembl ENCODE 550.8 +0.0 34 0.8 PKNOX1 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 ZNF766 ZNF213 E2F8 GC06M028798 TRA-AGC1-1 ZSCAN12 ZSCAN23 PGBD1 GABBR1 ZSCAN26 ZKSCAN8 ZFP57 ZKSCAN4
GH06I028794 Enhancer 1 Ensembl ENCODE 550.8 +1.4 1434 0.8 HDAC1 ZBTB40 ZNF2 ZNF335 ZNF366 ATF7 CEBPB REST CEBPA NBN GC06M028798 TRA-AGC1-1 ZNF603P ZFP57 TRF-GAA1-1 GC06P028492
GH06I028796 Enhancer 0.7 Ensembl 550.8 -0.7 -666 0.2 MCM2 ZBTB40 ZNF366 NCOR1 ADNP ZSCAN29 EZH2 SMARCE1 GATAD2A E2F5 GC06M028798 TRA-AGC1-1 ZKSCAN4 ZNF602P GC06M028919 GC06P028492
GH06I028791 Enhancer 0.7 Ensembl dbSUPER 0.8 +4.7 4734 0.2 MNT ZBTB40 PRDM1 EZH2 ZBTB17 GC06M028797 TRF-GAA1-1 TRA-TGC1-1 GC06M028798 TRA-AGC1-1 GC06P028492
GH06I028792 Enhancer 0.6 Ensembl dbSUPER 0.8 +4.3 4334 0.2 MNT EZH2 GC06M028797 TRF-GAA1-1 TRA-TGC1-1 GC06M028798 TRA-AGC1-1 GC06P028492
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC06M028798 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC06M028798 Gene

Genomic Locations for GC06M028798 Gene
chr6:28,795,963-28,796,035
(GRCh38/hg38)
Size:
73 bases
Orientation:
Minus strand

Genomic View for GC06M028798 Gene

Genes around GC06M028798 on UCSC Golden Path with GeneCards custom track

GC06M028798 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06M028798 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC06M028798 Gene

Proteins for GC06M028798 Gene

Post-translational modifications for GC06M028798 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06M028798 Gene

Domains & Families for GC06M028798 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06M028798 Gene

Function for GC06M028798 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06M028798 Gene

Localization for GC06M028798 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06M028798 Gene

Pathways & Interactions for GC06M028798 Gene

SuperPathways for GC06M028798 Gene

No Data Available

Interacting Proteins for GC06M028798 Gene

Gene Ontology (GO) - Biological Process for GC06M028798 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06M028798 Gene

Drugs & Compounds for GC06M028798 Gene

No Compound Related Data Available

Transcripts for GC06M028798 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC06M028798 Gene

No ASD Table

Relevant External Links for GC06M028798 Gene

GeneLoc Exon Structure for
GC06M028798

No data available for mRNA/cDNA for GC06M028798 Gene

Expression for GC06M028798 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06M028798 Gene

Orthologs for GC06M028798 Gene

No data available for Orthologs and Evolution for GC06M028798 Gene

Paralogs for GC06M028798 Gene

No data available for Paralogs for GC06M028798 Gene

Variants for GC06M028798 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC06M028798 Gene

Disorders for GC06M028798 Gene

No disorders were found for GC06M028798 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06M028798 Gene

Publications for GC06M028798 Gene

  1. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. (PMID: 9023104) Lowe TM … Eddy SR (Nucleic acids research 1997) 1
  2. The tertiary structure of tRNA and the development of the genetic code. (PMID: 8256282) Hou YM (Trends in biochemical sciences 1993) 1

Products for GC06M028798 Gene

Sources for GC06M028798 Gene

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