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Aliases for GC06M028544 Gene

Subcategory (RNA class) for GC06M028544 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for GC06M028544 Gene

No Aliases found

No data available for External Ids for GC06M028544 Gene

Summaries for GC06M028544 Gene

GeneCards Summary for GC06M028544 Gene

GC06M028544 is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for GC06M028544 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC06M028544 Gene

Genomics for GC06M028544 Gene

GeneHancer (GH) Regulatory Elements for GC06M028544 Gene

Promoters and enhancers for GC06M028544 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I028542 Enhancer 1.3 Ensembl ENCODE 550.8 -0.2 -229 2.4 HDGF PKNOX1 ARNT ZFP64 ARID4B SIN3A FEZF1 ZNF2 ZNF766 ZNF213 GC06M028544 TRR-TCG5-1 ZKSCAN8 ZSCAN12 ZSCAN23 ZKSCAN3 TRIM27 ZSCAN9 PGBD1 ZNF603P
GH06I028553 Enhancer 1.2 Ensembl ENCODE 0.4 -10.8 -10825 1.5 HDGF PKNOX1 ARNT YBX1 YY1 POLR2B ZNF766 E2F8 ZHX2 MXD4 ZNF603P ZKSCAN4 ZSCAN23 ZKSCAN3 ZSCAN9 ZKSCAN8 GPX5 ZSCAN12 OR2E1P COX11P1
GH06I028537 Enhancer 0.9 Ensembl ENCODE 0.4 +5.6 5585 1.2 HDAC1 PKNOX1 BACH1 EBF1 ETS1 FOSL1 POLR3A SCRT2 ATF7 ZEB2 GC06P028538 TRI-TAT3-1 GC06M028544 TRR-TCG5-1 GC06P028492
GH06I028552 Enhancer 0.8 ENCODE 0.4 -9.4 -9387 0.2 HDAC1 TCF12 ZNF766 ETV6 ATF7 CREM REST ZEB2 ELF1 MTA1 GPX5 OR2E1P COX11P1 ZSCAN23 GC06M028544 TRR-TCG5-1 PIR44110 GC06P028492
GH06I028565 Enhancer 1 ENCODE 0.3 -23.2 -23218 1.1 PKNOX1 SMAD1 ATF1 MLX ARNT NCOA2 TCF12 ZNF766 CBX5 GATA2 PIR44110 ZNF603P GPX6 OR2E1P COX11P1 ZSCAN23 GPX5 GC06M028544 TRR-TCG5-1 GC06P028492
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC06M028544 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC06M028544 Gene

Genomic Locations for GC06M028544 Gene
chr6:28,543,113-28,543,186
(GRCh38/hg38)
Size:
74 bases
Orientation:
Minus strand

Genomic View for GC06M028544 Gene

Genes around GC06M028544 on UCSC Golden Path with GeneCards custom track

GC06M028544 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06M028544 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC06M028544 Gene

Proteins for GC06M028544 Gene

Post-translational modifications for GC06M028544 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06M028544 Gene

Domains & Families for GC06M028544 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06M028544 Gene

Function for GC06M028544 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06M028544 Gene

Localization for GC06M028544 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06M028544 Gene

Pathways & Interactions for GC06M028544 Gene

SuperPathways for GC06M028544 Gene

No Data Available

Interacting Proteins for GC06M028544 Gene

Gene Ontology (GO) - Biological Process for GC06M028544 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06M028544 Gene

Drugs & Compounds for GC06M028544 Gene

No Compound Related Data Available

Transcripts for GC06M028544 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC06M028544 Gene

No ASD Table

Relevant External Links for GC06M028544 Gene

GeneLoc Exon Structure for
GC06M028544

No data available for mRNA/cDNA for GC06M028544 Gene

Expression for GC06M028544 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06M028544 Gene

Orthologs for GC06M028544 Gene

No data available for Orthologs and Evolution for GC06M028544 Gene

Paralogs for GC06M028544 Gene

No data available for Paralogs for GC06M028544 Gene

Variants for GC06M028544 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC06M028544 Gene

Disorders for GC06M028544 Gene

No disorders were found for GC06M028544 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06M028544 Gene

Publications for GC06M028544 Gene

  1. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. (PMID: 9023104) Lowe TM … Eddy SR (Nucleic acids research 1997) 1
  2. The tertiary structure of tRNA and the development of the genetic code. (PMID: 8256282) Hou YM (Trends in biochemical sciences 1993) 1

Products for GC06M028544 Gene

Sources for GC06M028544 Gene

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