Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC06M027207 Gene

Subcategory (RNA class) for GC06M027207 Gene

tRNA

Quality Score for this RNA gene is

15

Aliases for GC06M027207 Gene

No Aliases found

ORGUL Members for GC06M027207 Gene

No data available for External Ids for GC06M027207 Gene

Summaries for GC06M027207 Gene

GeneCards Summary for GC06M027207 Gene

GC06M027207 is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for GC06M027207 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC06M027207 Gene

Genomics for GC06M027207 Gene

GeneHancer (GH) Regulatory Elements for GC06M027207 Gene

Promoters and enhancers for GC06M027207 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J027205 Enhancer 0.9 Ensembl ENCODE 650.7 +0.2 177 1.2 HDAC1 HDGF IRF2 USF1 MAX SIN3A GTF3C2 POLR3A ADNP VEZF1 GC06M027207 TRV-CAC6-1 ABT1 ZKSCAN8 BTN2A3P POM121L2 ZNF391 BTN3A1 BTN3A2 ZNF602P
GH06J027187 Enhancer 1.5 FANTOM5 Ensembl ENCODE 0.4 +17.7 17685 2.2 HDGF PKNOX1 ATF1 ARNT SIN3A ZNF2 YY1 TCF12 POLR2B FOS ABT1 HMGN4 BTN2A3P BTN2A1 BTN2A2 HIST1H2AH BTN3A2 LOC102724851 TRI-AAT5-2 GC06M027207
GH06J027176 Enhancer 1.6 FANTOM5 Ensembl ENCODE 0.3 +28.5 28547 3.2 HDGF PKNOX1 SMAD1 ARNT SIN3A ZNF2 YY1 ZNF213 E2F8 ZNF143 TRI-AAT5-2 ZKSCAN8 ABT1 BTN3A2 BTN2A2 BTN2A1 ZNF204P BTN2A3P HMGN4 ZNF391
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC06M027207 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC06M027207 Gene

Genomic Locations for GC06M027207 Gene
chr6:27,206,087-27,206,160
(GRCh38/hg38)
Size:
74 bases
Orientation:
Minus strand
chr6:27,198,343-27,198,373
(GRCh37/hg19)
Size:
31 bases
Orientation:
Minus strand

Genomic View for GC06M027207 Gene

Genes around GC06M027207 on UCSC Golden Path with GeneCards custom track

GC06M027207 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06M027207 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC06M027207 Gene

Proteins for GC06M027207 Gene

Post-translational modifications for GC06M027207 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06M027207 Gene

Domains & Families for GC06M027207 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06M027207 Gene

Function for GC06M027207 Gene

Phenotypes From GWAS Catalog for GC06M027207 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06M027207 Gene

Localization for GC06M027207 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06M027207 Gene

Pathways & Interactions for GC06M027207 Gene

SuperPathways for GC06M027207 Gene

No Data Available

Interacting Proteins for GC06M027207 Gene

Gene Ontology (GO) - Biological Process for GC06M027207 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06M027207 Gene

Drugs & Compounds for GC06M027207 Gene

No Compound Related Data Available

Transcripts for GC06M027207 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC06M027207 Gene

No ASD Table

Relevant External Links for GC06M027207 Gene

GeneLoc Exon Structure for
GC06M027207

No data available for mRNA/cDNA for GC06M027207 Gene

Expression for GC06M027207 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06M027207 Gene

Orthologs for GC06M027207 Gene

No data available for Orthologs and Evolution for GC06M027207 Gene

Paralogs for GC06M027207 Gene

No data available for Paralogs for GC06M027207 Gene

Variants for GC06M027207 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC06M027207 Gene

Disorders for GC06M027207 Gene

No disorders were found for GC06M027207 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06M027207 Gene

Publications for GC06M027207 Gene

  1. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. (PMID: 9023104) Lowe TM … Eddy SR (Nucleic acids research 1997) 1
  2. The tertiary structure of tRNA and the development of the genetic code. (PMID: 8256282) Hou YM (Trends in biochemical sciences 1993) 1

Products for GC06M027207 Gene

Sources for GC06M027207 Gene

Content
Loading form....