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Aliases for GC05P139102 Gene

Subcategory (RNA class) for GC05P139102 Gene

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Quality Score for this RNA gene is

1

Aliases for GC05P139102 Gene

No Aliases found

No data available for External Ids for GC05P139102 Gene

Summaries for GC05P139102 Gene

GeneCards Summary for GC05P139102 Gene

GC05P139102 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC05P139102 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

Additional gene information for GC05P139102 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC05P139102 Gene

Genomics for GC05P139102 Gene

GeneHancer (GH) Regulatory Elements for GC05P139102 Gene

Promoters and enhancers for GC05P139102 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I139100 Enhancer 0.9 FANTOM5 dbSUPER 550.8 -1.5 -1468 0.2 JUN FOSL1 CTBP1 GATA3 FOSL2 ZNF600 FOS TCF7L2 ZNF362 DPF2 GC05P139102 GC05P139103 GC05P139104 GC05P139105 GC05P139106 PIR40506 GC05P139072 GC05P138946 SIL1
GH05I139103 Enhancer 0.2 dbSUPER 550.8 +0.7 654 0.2 GC05P139102 GC05P139103 GC05P139104 GC05P139105 GC05P139106 GC05P139162 GC05P139163 GC05P138946 SIL1
GH05I139104 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.8 +2.7 2670 2.2 ZFHX2 MXI1 POLR2A FOS FEZF1 EGR2 LRRTM2 DNAJC18 MATR3 GC05P139102 GC05P139103 GC05P139106 GC05P139105 GC05P139104 GC05P139162 GC05P139163
GH05I139140 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +39.0 38961 1.8 FOXA2 RAD21 RARA YY1 TCF12 RUNX3 RXRA CBFB CEBPB MIER2 GC05P139162 GC05P139163 GC05P139102 GC05P139103 GC05P139104 GC05P139105 GC05P139106 SIL1 GC05P138946
GH05I139131 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 +30.0 29995 2.7 MAZ ZNF521 ZNF398 ZIC2 ZNF335 ZFHX2 ZBTB48 ZNF341 PRDM10 PRDM1 MATR3 LOC105379194 NRG2 SIL1 GC05P139102 GC05P139103 GC05P139104 GC05P139105 GC05P139106 GC05P139162
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC05P139102 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC05P139102 Gene

Genomic Locations for GC05P139102 Gene
chr5:139,102,487-139,102,686
(GRCh38/hg38)
Size:
200 bases
Orientation:
Plus strand

Genomic View for GC05P139102 Gene

Genes around GC05P139102 on UCSC Golden Path with GeneCards custom track

GC05P139102 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC05P139102 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC05P139102 Gene

Proteins for GC05P139102 Gene

Post-translational modifications for GC05P139102 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC05P139102 Gene

Domains & Families for GC05P139102 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC05P139102 Gene

Function for GC05P139102 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC05P139102 Gene

Localization for GC05P139102 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC05P139102 Gene

Pathways & Interactions for GC05P139102 Gene

SuperPathways for GC05P139102 Gene

No Data Available

Interacting Proteins for GC05P139102 Gene

Gene Ontology (GO) - Biological Process for GC05P139102 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC05P139102 Gene

Drugs & Compounds for GC05P139102 Gene

No Compound Related Data Available

Transcripts for GC05P139102 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC05P139102 Gene

No ASD Table

Relevant External Links for GC05P139102 Gene

GeneLoc Exon Structure for
GC05P139102

No data available for mRNA/cDNA for GC05P139102 Gene

Expression for GC05P139102 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC05P139102 Gene

Orthologs for GC05P139102 Gene

No data available for Orthologs and Evolution for GC05P139102 Gene

Paralogs for GC05P139102 Gene

No data available for Paralogs for GC05P139102 Gene

Variants for GC05P139102 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC05P139102 Gene

Disorders for GC05P139102 Gene

No disorders were found for GC05P139102 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC05P139102 Gene

Publications for GC05P139102 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC05P139102 Gene

Sources for GC05P139102 Gene

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