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Aliases for GC05M173296 Gene

Subcategory (RNA class) for GC05M173296 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC05M173296 Gene

No Aliases found

ORGUL Members for GC05M173296 Gene

No data available for External Ids for GC05M173296 Gene

Summaries for GC05M173296 Gene

GeneCards Summary for GC05M173296 Gene

GC05M173296 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC05M173296 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC05M173296 Gene

Genomics for GC05M173296 Gene

GeneHancer (GH) Regulatory Elements for GC05M173296 Gene

Promoters and enhancers for GC05M173296 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J173301 Enhancer 1.4 Ensembl ENCODE dbSUPER 650.7 +1.7 1680 3.3 PKNOX1 FOXA2 ARID4B FEZF1 ZBTB7B E2F8 FOS SP5 NFYC MXD4 GC05M173296 BOD1 RNA5SP200 GC05P173099
GH05J173304 Enhancer 0.8 ENCODE 650.7 -0.1 -97 0.2 ELF3 FOXA2 ARID4B RAD21 DNMT3B THRB ZSCAN9 RARA ETS1 ZNF614 GC05M173296 STC2 GC05P173099
GH05J173322 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 0.3 -22.9 -22908 9.6 CLOCK MLX FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 ZNF143 ZNF263 STC2 SH3PXD2B BOD1 CREBRF LOC102724551 ENSG00000253172 ENSG00000253628 RPL12P22 ENSG00000254011 LOC100268168
GH05J173315 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -11.3 -11343 1.8 PKNOX1 CLOCK SIN3A FEZF1 ZNF121 GLIS2 ZNF213 E2F8 FOS PAF1 GC05M173296 STC2 GC05P173099
GH05J173293 Enhancer 1.1 Ensembl ENCODE 0.4 +10.5 10495 0.8 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZNF48 ZNF121 ZNF213 ARID2 ZNF207 RNA5SP200 GC05M173296 GC05P173099
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC05M173296 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC05M173296 Gene

Genomic Locations for GC05M173296 Gene
chr5:173,296,119-173,304,696
(GRCh38/hg38)
Size:
8,578 bases
Orientation:
Minus strand

Genomic View for GC05M173296 Gene

Genes around GC05M173296 on UCSC Golden Path with GeneCards custom track

GC05M173296 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC05M173296 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC05M173296 Gene

Proteins for GC05M173296 Gene

Post-translational modifications for GC05M173296 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC05M173296 Gene

Domains & Families for GC05M173296 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC05M173296 Gene

Function for GC05M173296 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC05M173296 Gene

Localization for GC05M173296 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC05M173296 Gene

Pathways & Interactions for GC05M173296 Gene

SuperPathways for GC05M173296 Gene

No Data Available

Interacting Proteins for GC05M173296 Gene

Gene Ontology (GO) - Biological Process for GC05M173296 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC05M173296 Gene

Drugs & Compounds for GC05M173296 Gene

No Compound Related Data Available

Transcripts for GC05M173296 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC05M173296 Gene

No ASD Table

Relevant External Links for GC05M173296 Gene

GeneLoc Exon Structure for
GC05M173296

No data available for mRNA/cDNA for GC05M173296 Gene

Expression for GC05M173296 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC05M173296 Gene

Orthologs for GC05M173296 Gene

No data available for Orthologs and Evolution for GC05M173296 Gene

Paralogs for GC05M173296 Gene

No data available for Paralogs for GC05M173296 Gene

Variants for GC05M173296 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC05M173296 Gene

Disorders for GC05M173296 Gene

No disorders were found for GC05M173296 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC05M173296 Gene

Publications for GC05M173296 Gene

No publications were found for GC05M173296 Gene.

Products for GC05M173296 Gene

Sources for GC05M173296 Gene

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