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Aliases for GC05M149941 Gene

Subcategory (RNA class) for GC05M149941 Gene

Y RNA

Quality Score for this RNA gene is

15

Aliases for GC05M149941 Gene

No Aliases found

ORGUL Members for GC05M149941 Gene

No data available for External Ids for GC05M149941 Gene

Summaries for GC05M149941 Gene

GeneCards Summary for GC05M149941 Gene

GC05M149941 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC05M149941 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC05M149941 Gene

Genomics for GC05M149941 Gene

GeneHancer (GH) Regulatory Elements for GC05M149941 Gene

Promoters and enhancers for GC05M149941 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J149935 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 650.7 -1.2 -1203 12.4 PKNOX1 SMAD1 FOXA2 ARNT SIN3A FEZF1 POLR2B ZNF766 FOS JUNB ENSG00000200334 GC05M149941 PDE6A SLC26A2 PPARGC1B CSNK1A1 CD74 HMGXB3
GH05J149949 Enhancer 0.4 FANTOM5 0.4 -9.1 -9094 0.2 JUND CEBPB HMGXB3 TIGD6 RNU6-588P SLC26A2 CSNK1A1 CD74 GC05M149941 ENSG00000200334 PDE6A
GH05J149953 Enhancer 0.3 FANTOM5 0.4 -13.5 -13535 0.1 CBFA2T3 TIGD6 HMGXB3 PDE6A GC05M149941 ENSG00000200334
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC05M149941 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC05M149941 Gene

Genomic Locations for GC05M149941 Gene
chr5:149,940,031-149,940,131
(GRCh38/hg38)
Size:
101 bases
Orientation:
Minus strand

Genomic View for GC05M149941 Gene

Genes around GC05M149941 on UCSC Golden Path with GeneCards custom track

GC05M149941 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC05M149941 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC05M149941 Gene

Proteins for GC05M149941 Gene

Post-translational modifications for GC05M149941 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC05M149941 Gene

Domains & Families for GC05M149941 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC05M149941 Gene

Function for GC05M149941 Gene

Phenotypes From GWAS Catalog for GC05M149941 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC05M149941 Gene

Localization for GC05M149941 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC05M149941 Gene

Pathways & Interactions for GC05M149941 Gene

SuperPathways for GC05M149941 Gene

No Data Available

Interacting Proteins for GC05M149941 Gene

Gene Ontology (GO) - Biological Process for GC05M149941 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC05M149941 Gene

Drugs & Compounds for GC05M149941 Gene

No Compound Related Data Available

Transcripts for GC05M149941 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC05M149941 Gene

No ASD Table

Relevant External Links for GC05M149941 Gene

GeneLoc Exon Structure for
GC05M149941

No data available for mRNA/cDNA for GC05M149941 Gene

Expression for GC05M149941 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC05M149941 Gene

Orthologs for GC05M149941 Gene

No data available for Orthologs and Evolution for GC05M149941 Gene

Paralogs for GC05M149941 Gene

No data available for Paralogs for GC05M149941 Gene

Variants for GC05M149941 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC05M149941 Gene

Disorders for GC05M149941 Gene

No disorders were found for GC05M149941 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC05M149941 Gene

Publications for GC05M149941 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

Products for GC05M149941 Gene

Sources for GC05M149941 Gene

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