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Aliases for GC05M149853 Gene

Subcategory (RNA class) for GC05M149853 Gene

lncRNA

Quality Score for this RNA gene is

0

Aliases for GC05M149853 Gene

No Aliases found

ORGUL Members for GC05M149853 Gene

No data available for External Ids for GC05M149853 Gene

Summaries for GC05M149853 Gene

GeneCards Summary for GC05M149853 Gene

GC05M149853 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC05M149853 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC05M149853 Gene

Genomics for GC05M149853 Gene

GeneHancer (GH) Regulatory Elements for GC05M149853 Gene

Promoters and enhancers for GC05M149853 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I149869 Enhancer 0.3 ENCODE 550.8 -0.7 -685 0.8 FOXA1 GC05M149853 ENSG00000200334 PDE6A SLC26A2 HMGXB3 TIGD6 GC05P149885 GC05P149886
GH05I149856 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +11.3 11343 1.7 NCOA3 ZNF687 NFIB NEUROD1 MNT FOXA1 CTBP1 GATA3 CREB1 FOS SLC26A2 HMGXB3 TIGD6 GC05P149853 GC05M149853 PDE6A PPARGC1B
GH05I149852 Enhancer 0.9 ENCODE dbSUPER 0.4 +16.0 15963 0.6 CTCF FOXA2 SIN3A IRF4 RAD21 CC2D1A GATA3 FOXK2 SMC3 ZNF143 GC05P149853 SLC26A2 TIGD6 HMGXB3 ENSG00000200334 PDE6A GC05M149853 PPARGC1B
GH05I149877 Enhancer 0.7 ENCODE 0.4 -9.0 -9016 2.2 NCOA3 SOX13 ESRRA FOXA2 NFIB NEUROD1 SIN3A CEBPG CTBP1 GATA3 HMGXB3 GC05M149853 GC05P149885 GC05P149886 PDE6A
GH05I149860 Enhancer 0.6 ENCODE 0.4 +8.2 8203 0.1 SRF ZNF687 NR2F1 ZIC2 RELA GLIS1 IKZF1 ETV6 RUNX3 IKZF2 ENSG00000200334 PDE6A GC05M149853 GC05P149853
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC05M149853 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC05M149853 Gene

Genomic Locations for GC05M149853 Gene
chr5:149,852,397-149,869,156
(GRCh38/hg38)
Size:
16,760 bases
Orientation:
Minus strand

Genomic View for GC05M149853 Gene

Genes around GC05M149853 on UCSC Golden Path with GeneCards custom track

GC05M149853 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC05M149853 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC05M149853 Gene

Proteins for GC05M149853 Gene

Post-translational modifications for GC05M149853 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC05M149853 Gene

Domains & Families for GC05M149853 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC05M149853 Gene

Function for GC05M149853 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC05M149853 Gene

Localization for GC05M149853 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC05M149853 Gene

Pathways & Interactions for GC05M149853 Gene

SuperPathways for GC05M149853 Gene

No Data Available

Interacting Proteins for GC05M149853 Gene

Gene Ontology (GO) - Biological Process for GC05M149853 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC05M149853 Gene

Drugs & Compounds for GC05M149853 Gene

No Compound Related Data Available

Transcripts for GC05M149853 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC05M149853 Gene

No ASD Table

Relevant External Links for GC05M149853 Gene

GeneLoc Exon Structure for
GC05M149853

No data available for mRNA/cDNA for GC05M149853 Gene

Expression for GC05M149853 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC05M149853 Gene

Orthologs for GC05M149853 Gene

No data available for Orthologs and Evolution for GC05M149853 Gene

Paralogs for GC05M149853 Gene

No data available for Paralogs for GC05M149853 Gene

Variants for GC05M149853 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC05M149853 Gene

Disorders for GC05M149853 Gene

No disorders were found for GC05M149853 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC05M149853 Gene

Publications for GC05M149853 Gene

No publications were found for GC05M149853 Gene.

Products for GC05M149853 Gene

Sources for GC05M149853 Gene

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