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Aliases for GC05M149307 Gene

Subcategory (RNA class) for GC05M149307 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC05M149307 Gene

No Aliases found

ORGUL Members for GC05M149307 Gene

No data available for External Ids for GC05M149307 Gene

Summaries for GC05M149307 Gene

GeneCards Summary for GC05M149307 Gene

GC05M149307 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC05M149307 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC05M149307 Gene

Genomics for GC05M149307 Gene

GeneHancer (GH) Regulatory Elements for GC05M149307 Gene

Promoters and enhancers for GC05M149307 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J149312 Enhancer 0.4 dbSUPER 650.7 -0.7 -657 2.5 CTCF ZSCAN4 GC05M149307 ENSG00000253865 AFAP1L1 ENSG00000248647 ENSG00000253406 MIR143 MIR145 RNU6-588P CARMN IL17B
GH05J149317 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.7 -3.9 -3884 0.3 CTCF ESRRA ARNT TEAD4 ZNF2 RAD21 CC2D1A POLR2A BRD9 ZNF143 AFAP1L1 RNU6-588P ENSG00000248647 ENSG00000253406 GC05M149307 GRPEL2
GH05J149319 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -9.0 -9023 6.6 HDGF PKNOX1 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 YY1 ZNF766 HMGXB3 PCYOX1L RPL7P1 GRPEL2 ENSG00000251330 ENSG00000253865 GRPEL2-AS1 MIR145 AFAP1L1 MIR143
GH05J149311 Enhancer 0.8 Ensembl dbSUPER 0.7 +2.5 2474 0.2 KLF1 JUN INSM2 ZNF398 ATF2 NR2F2 OSR2 NFIC POLR2A PATZ1 GC05M149307 GC05M149294 AFAP1L1
GH05J149307 Enhancer 0.5 dbSUPER 0.4 +6.1 6143 0.7 NFIC ATF1 MAX MNT GC05M149294 GC05M149307 AFAP1L1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC05M149307 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC05M149307 Gene

Genomic Locations for GC05M149307 Gene
chr5:149,307,525-149,313,575
(GRCh38/hg38)
Size:
6,051 bases
Orientation:
Minus strand

Genomic View for GC05M149307 Gene

Genes around GC05M149307 on UCSC Golden Path with GeneCards custom track

GC05M149307 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC05M149307 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC05M149307 Gene

Proteins for GC05M149307 Gene

Post-translational modifications for GC05M149307 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC05M149307 Gene

Domains & Families for GC05M149307 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC05M149307 Gene

Function for GC05M149307 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC05M149307 Gene

Localization for GC05M149307 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC05M149307 Gene

Pathways & Interactions for GC05M149307 Gene

SuperPathways for GC05M149307 Gene

No Data Available

Interacting Proteins for GC05M149307 Gene

Gene Ontology (GO) - Biological Process for GC05M149307 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC05M149307 Gene

Drugs & Compounds for GC05M149307 Gene

No Compound Related Data Available

Transcripts for GC05M149307 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC05M149307 Gene

No ASD Table

Relevant External Links for GC05M149307 Gene

GeneLoc Exon Structure for
GC05M149307

No data available for mRNA/cDNA for GC05M149307 Gene

Expression for GC05M149307 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC05M149307 Gene

Orthologs for GC05M149307 Gene

No data available for Orthologs and Evolution for GC05M149307 Gene

Paralogs for GC05M149307 Gene

No data available for Paralogs for GC05M149307 Gene

Variants for GC05M149307 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC05M149307 Gene

Disorders for GC05M149307 Gene

No disorders were found for GC05M149307 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC05M149307 Gene

Publications for GC05M149307 Gene

No publications were found for GC05M149307 Gene.

Products for GC05M149307 Gene

Sources for GC05M149307 Gene

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