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Aliases for GC05M149047 Gene

Subcategory (RNA class) for GC05M149047 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC05M149047 Gene

No Aliases found

ORGUL Members for GC05M149047 Gene

No data available for External Ids for GC05M149047 Gene

Summaries for GC05M149047 Gene

GeneCards Summary for GC05M149047 Gene

GC05M149047 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC05M149047 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC05M149047 Gene

Genomics for GC05M149047 Gene

GeneHancer (GH) Regulatory Elements for GC05M149047 Gene

Promoters and enhancers for GC05M149047 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J149149 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 650.7 +0.8 793 6.3 PKNOX1 FOXA2 MLX DMAP1 YY1 ZNF766 REST ZNF592 KAT8 MEF2D GC05M149047 HMGXB3 RPL7P1 ENSG00000251330 AFAP1L1 RPS20P4 TIGD6 ENSG00000248647 ENSG00000253406 SH3TC2
GH05J149140 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +11.2 11213 4.5 FOXA2 ARID4B SIN3A ZNF48 YY1 GLIS2 ZNF143 ATF7 KLF13 SP3 ABLIM3 HMGXB3 FBXO38 ENSG00000251330 SH3TC2 ADRB2 GC05M149047
GH05J149133 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +18.3 18347 3.6 FOXA2 RAD21 RFX5 YY1 EGR1 FOS EGR2 SMARCC1 RXRA USF2 SH3TC2 AFAP1L1 SH3TC2-DT MIR584 RNU6-732P ENSG00000248647 ENSG00000253406 ABLIM3 GC05M149047 GC05M149117
GH05J149124 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE dbSUPER 0.3 +25.9 25858 6.2 NFIB ZSCAN4 NEUROD1 ZNF2 RAD21 ZNF143 FOS RCOR1 SMARCA5 ZNF654 SH3TC2 SH3TC2-DT MIR584 RNU6-732P AFAP1L1 ENSG00000248647 ENSG00000253406 ABLIM3 GC05M149117 RN7SKP145
GH05J149161 Enhancer 1.1 FANTOM5 dbSUPER 0.4 -7.5 -7506 0.1 ELF3 FOXA2 MLX DNMT3B ZNF48 RAD21 RARA ETS1 YY1 EGR1 AFAP1L1 ENSG00000253406 ENSG00000248647 ABLIM3 GC05M149047
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC05M149047 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC05M149047 Gene

Genomic Locations for GC05M149047 Gene
chr5:149,047,539-149,153,741
(GRCh38/hg38)
Size:
106,203 bases
Orientation:
Minus strand

Genomic View for GC05M149047 Gene

Genes around GC05M149047 on UCSC Golden Path with GeneCards custom track

GC05M149047 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC05M149047 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC05M149047 Gene

Proteins for GC05M149047 Gene

Post-translational modifications for GC05M149047 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC05M149047 Gene

Domains & Families for GC05M149047 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC05M149047 Gene

Function for GC05M149047 Gene

Phenotypes From GWAS Catalog for GC05M149047 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC05M149047 Gene

Localization for GC05M149047 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC05M149047 Gene

Pathways & Interactions for GC05M149047 Gene

SuperPathways for GC05M149047 Gene

No Data Available

Interacting Proteins for GC05M149047 Gene

Gene Ontology (GO) - Biological Process for GC05M149047 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC05M149047 Gene

Drugs & Compounds for GC05M149047 Gene

No Compound Related Data Available

Transcripts for GC05M149047 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC05M149047 Gene

No ASD Table

Relevant External Links for GC05M149047 Gene

GeneLoc Exon Structure for
GC05M149047

No data available for mRNA/cDNA for GC05M149047 Gene

Expression for GC05M149047 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC05M149047 Gene

Orthologs for GC05M149047 Gene

No data available for Orthologs and Evolution for GC05M149047 Gene

Paralogs for GC05M149047 Gene

No data available for Paralogs for GC05M149047 Gene

Variants for GC05M149047 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC05M149047 Gene

Disorders for GC05M149047 Gene

No disorders were found for GC05M149047 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC05M149047 Gene

Publications for GC05M149047 Gene

No publications were found for GC05M149047 Gene.

Products for GC05M149047 Gene

Sources for GC05M149047 Gene

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