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Aliases for GC05M142697 Gene

Subcategory (RNA class) for GC05M142697 Gene

IRES

Quality Score for this RNA gene is

2

Aliases for GC05M142697 Gene

No Aliases found

ORGUL Members for GC05M142697 Gene

No data available for External Ids for GC05M142697 Gene

Summaries for GC05M142697 Gene

GeneCards Summary for GC05M142697 Gene

GC05M142697 is an RNA Gene, and is affiliated with the IRES RNA class.

fRNAdb sequence ontologies for GC05M142697 Gene

  • internal_ribosome_entry_site: Sequence element that recruits a ribosomal subunit to internal mRNA for translation initiation.

Additional gene information for GC05M142697 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC05M142697 Gene

Genomics for GC05M142697 Gene

GeneHancer (GH) Regulatory Elements for GC05M142697 Gene

Promoters and enhancers for GC05M142697 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I142695 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 550.8 +0.1 123 3.4 FOXA2 RB1 NFIB SIN3A ZNF2 ZNF48 RAD21 RFX5 ARID2 ZNF366 GC05M142697 FGF1 KIAA0141 GC05P142651
GH05I142684 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE dbSUPER 0.4 +12.3 12272 3 FOXA2 RFX1 SAP130 ZSCAN4 ARID4B BACH1 ZIC2 ZFHX2 RFX3 PRDM10 FGF1 GC05M142697 GC05P142651
GH05I142680 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +16.7 16696 1.7 PKNOX1 FOXA2 NEUROD1 RARA ETS1 SCRT2 FOS RCOR1 KLF13 SMARCC1 FGF1 GC05M142697 GC05P142651
GH05I142655 Enhancer 1 ENCODE dbSUPER 0.3 +41.9 41939 0.2 ELF3 FOXA2 RB1 ARID4B ZNF2 ZNF48 ZSCAN9 RAD21 ZNF143 RUNX3 GC05P142651 GC05M142697 FGF1 SPRY4-AS1
GH05I142673 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.3 +22.6 22630 3.4 FOXA2 JUN HLF FGF1 GC05M142697 GC05P142651
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC05M142697 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC05M142697 Gene

Genomic Locations for GC05M142697 Gene
chr5:142,697,632-142,697,800
(GRCh38/hg38)
Size:
169 bases
Orientation:
Minus strand

Genomic View for GC05M142697 Gene

Genes around GC05M142697 on UCSC Golden Path with GeneCards custom track

GC05M142697 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC05M142697 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC05M142697 Gene

Proteins for GC05M142697 Gene

Post-translational modifications for GC05M142697 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC05M142697 Gene

Domains & Families for GC05M142697 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC05M142697 Gene

Function for GC05M142697 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC05M142697 Gene

Localization for GC05M142697 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC05M142697 Gene

Pathways & Interactions for GC05M142697 Gene

SuperPathways for GC05M142697 Gene

No Data Available

Interacting Proteins for GC05M142697 Gene

Gene Ontology (GO) - Biological Process for GC05M142697 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC05M142697 Gene

Drugs & Compounds for GC05M142697 Gene

No Compound Related Data Available

Transcripts for GC05M142697 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC05M142697 Gene

No ASD Table

Relevant External Links for GC05M142697 Gene

GeneLoc Exon Structure for
GC05M142697

No data available for mRNA/cDNA for GC05M142697 Gene

Expression for GC05M142697 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC05M142697 Gene

Orthologs for GC05M142697 Gene

No data available for Orthologs and Evolution for GC05M142697 Gene

Paralogs for GC05M142697 Gene

No data available for Paralogs for GC05M142697 Gene

Variants for GC05M142697 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC05M142697 Gene

Disorders for GC05M142697 Gene

No disorders were found for GC05M142697 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC05M142697 Gene

Publications for GC05M142697 Gene

  1. Internal ribosome entry site structural motifs conserved among mammalian fibroblast growth factor 1 alternatively spliced mRNAs. (PMID: 15314170) Martineau Y … Prats AC (Molecular and cellular biology 2004) 1

Products for GC05M142697 Gene

Sources for GC05M142697 Gene

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