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Aliases for GC05M142626 Gene

Subcategory (RNA class) for GC05M142626 Gene


Quality Score for this RNA gene is


Aliases for GC05M142626 Gene

No Aliases found

ORGUL Members for GC05M142626 Gene

No data available for External Ids for GC05M142626 Gene

Summaries for GC05M142626 Gene

GeneCards Summary for GC05M142626 Gene

GC05M142626 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC05M142626 Gene

  • H_ACA_box_snoRNA: Members of the box H/ACA family contain an ACA triplet, exactly 3 nt upstream from the 3' end and an H-box in a hinge region that links two structurally similar functional domains of the molecule. Both boxes are important for snoRNA biosynthesis and function. A few box H/ACA snoRNAs are involved in rRNA processing; most others are known or predicted to participate in selection of uridine nucleosides in rRNA to be converted to pseudouridines. Site selection is mediated by direct base pairing of the snoRNA with rRNA through one or both targeting domains.

Additional gene information for GC05M142626 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC05M142626 Gene

Genomics for GC05M142626 Gene

GeneHancer (GH) Regulatory Elements for GC05M142626 Gene

Promoters and enhancers for GC05M142626 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J142624 Enhancer 0.9 Ensembl ENCODE dbSUPER 650.7 +0.6 552 2.2 ZNF316 MAFG NFE2 ZNF662 MAFK GABPA NR2F2 GC05M142626 FGF1 RPL7P21 SPRY4-AS1 RPS12P10
GH05J142620 Promoter/Enhancer 1.1 EPDnew Ensembl ENCODE 0.7 +4.5 4467 2.1 JUND ZNF189 FOS FGF1 GC05M142626 RPS12P10 SPRY4-AS1
GH05J142643 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -18.5 -18530 2.3 PKNOX1 INSM2 KLF17 GLIS2 ZNF366 FOS EGR2 ZNF362 YY2 CEBPB GC05P142651 GC05M142626 FGF1 SPRY4-AS1
GH05J142597 Enhancer 0.9 Ensembl ENCODE 0.3 +28.1 28059 1.4 CTCF JUN BACH1 FOSL1 ZNF316 RBAK FOSL2 FOS ZNF600 NFE2 DELE1 GNPDA1 GC05M142626 RPS12P10 FGF1 SPRY4-AS1
GH05J142600 Enhancer 0.9 Ensembl ENCODE 0.3 +25.4 25445 1.7 CTCF ZNF768 FOXA2 MAX RAD21 FOSL1 ZNF335 EGR1 RXRA REST GC05M142626 RPS12P10 FGF1 SPRY4-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC05M142626 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC05M142626 Gene

Genomic Locations for GC05M142626 Gene
138 bases
Minus strand

Genomic View for GC05M142626 Gene

Genes around GC05M142626 on UCSC Golden Path with GeneCards custom track

GC05M142626 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC05M142626 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC05M142626 Gene

Proteins for GC05M142626 Gene

Post-translational modifications for GC05M142626 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC05M142626 Gene

Domains & Families for GC05M142626 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC05M142626 Gene

Function for GC05M142626 Gene

Phenotypes From GWAS Catalog for GC05M142626 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC05M142626 Gene

Localization for GC05M142626 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC05M142626 Gene

Pathways & Interactions for GC05M142626 Gene

SuperPathways for GC05M142626 Gene

No Data Available

Interacting Proteins for GC05M142626 Gene

Gene Ontology (GO) - Biological Process for GC05M142626 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC05M142626 Gene

Drugs & Compounds for GC05M142626 Gene

No Compound Related Data Available

Transcripts for GC05M142626 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC05M142626 Gene

No ASD Table

Relevant External Links for GC05M142626 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC05M142626 Gene

Expression for GC05M142626 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC05M142626 Gene

Orthologs for GC05M142626 Gene

No data available for Orthologs and Evolution for GC05M142626 Gene

Paralogs for GC05M142626 Gene

No data available for Paralogs for GC05M142626 Gene

Variants for GC05M142626 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC05M142626 Gene

Disorders for GC05M142626 Gene

No disorders were found for GC05M142626 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC05M142626 Gene

Publications for GC05M142626 Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss AM … Kiss T (Molecular and cellular biology 2004) 1
  2. Small nucleolar RNAs: an abundant group of noncoding RNAs with diverse cellular functions. (PMID: 12007400) Kiss T (Cell 2002) 1
  3. RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. (PMID: 11387227) Hüttenhofer A … Brosius J (The EMBO journal 2001) 1

Products for GC05M142626 Gene

Sources for GC05M142626 Gene

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