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Aliases for GC05M142394 Gene

Subcategory (RNA class) for GC05M142394 Gene

tRNA

Quality Score for this RNA gene is

15

Aliases for GC05M142394 Gene

No Aliases found

ORGUL Members for GC05M142394 Gene

No data available for External Ids for GC05M142394 Gene

Summaries for GC05M142394 Gene

GeneCards Summary for GC05M142394 Gene

GC05M142394 is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for GC05M142394 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC05M142394 Gene

Genomics for GC05M142394 Gene

GeneHancer (GH) Regulatory Elements for GC05M142394 Gene

Promoters and enhancers for GC05M142394 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J142388 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.7 +4.0 3956 3.9 HDAC1 TAF9B KLF17 MZF1 FEZF1 ZNF366 SCRT2 ZNF680 CAVIN1 CEBPB LINC01844 FCHSD1 LOC102723915 HDAC3 GC05M142394 GC05P142356 SPRY4-AS1
GH05J142355 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +33.9 33867 9.9 MLX ZFP64 FEZF1 DMAP1 YY1 ZNF143 SP3 ZNF585B GLIS1 RCOR2 FCHSD1 ARHGAP26 SPRY4 SPRY4-AS1 HDAC3 PCDHGA6 GNPDA1 PCDHGA7 LOC102723915 LINC01844
GH05J142366 Enhancer 0.7 dbSUPER 0.3 +26.5 26546 2.4 BCOR KLF1 ZMYM3 FOSL1 PHF20 ADNP SMARCE1 ZNF362 SOX6 CEBPB SPRY4 SPRY4-AS1 GC05P142356 GC05M142394
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC05M142394 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC05M142394 Gene

Genomic Locations for GC05M142394 Gene
chr5:142,394,422-142,394,494
(GRCh38/hg38)
Size:
73 bases
Orientation:
Minus strand

Genomic View for GC05M142394 Gene

Genes around GC05M142394 on UCSC Golden Path with GeneCards custom track

GC05M142394 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC05M142394 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC05M142394 Gene

Proteins for GC05M142394 Gene

Post-translational modifications for GC05M142394 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC05M142394 Gene

Domains & Families for GC05M142394 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC05M142394 Gene

Function for GC05M142394 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC05M142394 Gene

Localization for GC05M142394 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC05M142394 Gene

Pathways & Interactions for GC05M142394 Gene

SuperPathways for GC05M142394 Gene

No Data Available

Interacting Proteins for GC05M142394 Gene

Gene Ontology (GO) - Biological Process for GC05M142394 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC05M142394 Gene

Drugs & Compounds for GC05M142394 Gene

No Compound Related Data Available

Transcripts for GC05M142394 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC05M142394 Gene

No ASD Table

Relevant External Links for GC05M142394 Gene

GeneLoc Exon Structure for
GC05M142394

No data available for mRNA/cDNA for GC05M142394 Gene

Expression for GC05M142394 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC05M142394 Gene

Orthologs for GC05M142394 Gene

No data available for Orthologs and Evolution for GC05M142394 Gene

Paralogs for GC05M142394 Gene

No data available for Paralogs for GC05M142394 Gene

Variants for GC05M142394 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC05M142394 Gene

Disorders for GC05M142394 Gene

No disorders were found for GC05M142394 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC05M142394 Gene

Publications for GC05M142394 Gene

  1. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. (PMID: 9023104) Lowe TM … Eddy SR (Nucleic acids research 1997) 1
  2. The tertiary structure of tRNA and the development of the genetic code. (PMID: 8256282) Hou YM (Trends in biochemical sciences 1993) 1

Products for GC05M142394 Gene

Sources for GC05M142394 Gene

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