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Aliases for GC05M136082 Gene

Subcategory (RNA class) for GC05M136082 Gene

vault RNA

Quality Score for this RNA gene is

2

Aliases for GC05M136082 Gene

No Aliases found

ORGUL Members for GC05M136082 Gene

No data available for External Ids for GC05M136082 Gene

Summaries for GC05M136082 Gene

GeneCards Summary for GC05M136082 Gene

GC05M136082 is an RNA Gene, and is affiliated with the vault RNA class.

fRNAdb sequence ontologies for GC05M136082 Gene

  • vault_RNA: A family of RNAs are found as part of the enigmatic vault ribonucleoprotein complex. The complex consists of a major vault protein (MVP), two minor vault proteins (VPARP and TEP1), and several small untranslated RNA molecules. It has been suggested that the vault complex is involved in drug resistance.

Additional gene information for GC05M136082 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC05M136082 Gene

Genomics for GC05M136082 Gene

GeneHancer (GH) Regulatory Elements for GC05M136082 Gene

Promoters and enhancers for GC05M136082 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I136079 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE 550.8 -0.3 -261 1.7 PKNOX1 ATF1 ARNT IRF4 BRCA1 YY1 NCOA2 GTF3C2 POLR2B GATA2 ENSG00000278815 GC05M136082 VTRNA2-1 SMAD5 LECT2 SMAD5-AS1 ENSG00000277859
GH05I136065 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +14.1 14093 2.1 ELF3 SOX13 CTCF ZSCAN4 MAX CEBPG THRB ZNF48 RAD21 YY1 LECT2 GC05M136082 TGFBI
GH05I136051 Enhancer 1.5 Ensembl ENCODE dbSUPER 0.3 +24.6 24635 9 PKNOX1 FOXA2 MLX ARID4B NEUROD1 SIN3A FEZF1 DMAP1 YY1 FOS SMAD5 LECT2 ENSG00000254239 IL9 SMIM32 GC05M136082 TGFBI
GH05I136028 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 0.2 +51.1 51117 2.1 ELF3 PKNOX1 ARID4B SIN3A ZNF48 RAD21 ZNF143 THAP11 MIXL1 KLF11 TGFBI SMIM32 GC05M136082
GH05I136062 Enhancer 0.9 ENCODE dbSUPER 0.4 +17.8 17849 0.2 CTCF ZNF687 ZNF654 RXRA TRIM22 CBFA2T3 REST THRB RAD21 JUND GC05M136082 TGFBI
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC05M136082 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC05M136082 Gene

Genomic Locations for GC05M136082 Gene
chr5:136,080,502-136,080,596
(GRCh38/hg38)
Size:
95 bases
Orientation:
Minus strand

Genomic View for GC05M136082 Gene

Genes around GC05M136082 on UCSC Golden Path with GeneCards custom track

GC05M136082 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC05M136082 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC05M136082 Gene

Proteins for GC05M136082 Gene

Post-translational modifications for GC05M136082 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC05M136082 Gene

Domains & Families for GC05M136082 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC05M136082 Gene

Function for GC05M136082 Gene

Phenotypes From GWAS Catalog for GC05M136082 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC05M136082 Gene

Localization for GC05M136082 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC05M136082 Gene

Pathways & Interactions for GC05M136082 Gene

SuperPathways for GC05M136082 Gene

No Data Available

Interacting Proteins for GC05M136082 Gene

Gene Ontology (GO) - Biological Process for GC05M136082 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC05M136082 Gene

Drugs & Compounds for GC05M136082 Gene

No Compound Related Data Available

Transcripts for GC05M136082 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC05M136082 Gene

No ASD Table

Relevant External Links for GC05M136082 Gene

GeneLoc Exon Structure for
GC05M136082

No data available for mRNA/cDNA for GC05M136082 Gene

Expression for GC05M136082 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC05M136082 Gene

Orthologs for GC05M136082 Gene

No data available for Orthologs and Evolution for GC05M136082 Gene

Paralogs for GC05M136082 Gene

No data available for Paralogs for GC05M136082 Gene

Variants for GC05M136082 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC05M136082 Gene

Disorders for GC05M136082 Gene

No disorders were found for GC05M136082 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC05M136082 Gene

Publications for GC05M136082 Gene

No publications were found for GC05M136082 Gene.

Products for GC05M136082 Gene

Sources for GC05M136082 Gene

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