Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC05M135339 Gene

Subcategory (RNA class) for GC05M135339 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC05M135339 Gene

No Aliases found

ORGUL Members for GC05M135339 Gene

No data available for External Ids for GC05M135339 Gene

Summaries for GC05M135339 Gene

GeneCards Summary for GC05M135339 Gene

GC05M135339 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC05M135339 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC05M135339 Gene

Genomics for GC05M135339 Gene

GeneHancer (GH) Regulatory Elements for GC05M135339 Gene

Promoters and enhancers for GC05M135339 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J135347 Enhancer 0.4 dbSUPER 650.7 +0.2 207 3.3 ZNF384 FEZF1 GC05M135339 ENSG00000270021 H2AFY GC05M135248 C5orf66
GH05J135344 Enhancer 0.6 ENCODE dbSUPER 0.7 +3.5 3481 3.1 NFATC1 SCRT2 H2AFY GC05M135339 GC05M135248 C5orf66
GH05J135353 Enhancer 0.8 ENCODE dbSUPER 0.4 -5.9 -5874 4.3 RXRA REST NR2F2 SP1 NFIC JUND RCOR1 ZBTB17 ENSG00000270021 H2AFY DCANP1 GC05M135339 PIR34891 C5orf66
GH05J135329 Enhancer 0.8 ENCODE dbSUPER 0.4 +19.4 19447 1 SOX5 SOX13 GATAD2A FOXA2 MLX REST ETV5 RBPJ RARA ZNF205 ENSG00000270021 GC05M135339 GC05M135248 C5orf66
GH05J135263 Enhancer 1.5 UCNEbase ENCODE dbSUPER 0.2 +84.3 84289 4.2 FOXA2 ZFP64 ARID4B DMAP1 ZNF48 ETS1 NFKBIZ PPARG KAT8 NFIL3 H2AFY GC05M135248 GC05M135339 C5orf66
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC05M135339 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC05M135339 Gene

Genomic Locations for GC05M135339 Gene
chr5:135,339,112-135,349,727
(GRCh38/hg38)
Size:
10,616 bases
Orientation:
Minus strand

Genomic View for GC05M135339 Gene

Genes around GC05M135339 on UCSC Golden Path with GeneCards custom track

GC05M135339 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC05M135339 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC05M135339 Gene

Proteins for GC05M135339 Gene

Post-translational modifications for GC05M135339 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC05M135339 Gene

Domains & Families for GC05M135339 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC05M135339 Gene

Function for GC05M135339 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC05M135339 Gene

Localization for GC05M135339 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC05M135339 Gene

Pathways & Interactions for GC05M135339 Gene

SuperPathways for GC05M135339 Gene

No Data Available

Interacting Proteins for GC05M135339 Gene

Gene Ontology (GO) - Biological Process for GC05M135339 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC05M135339 Gene

Drugs & Compounds for GC05M135339 Gene

No Compound Related Data Available

Transcripts for GC05M135339 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC05M135339 Gene

No ASD Table

Relevant External Links for GC05M135339 Gene

GeneLoc Exon Structure for
GC05M135339

No data available for mRNA/cDNA for GC05M135339 Gene

Expression for GC05M135339 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC05M135339 Gene

Orthologs for GC05M135339 Gene

No data available for Orthologs and Evolution for GC05M135339 Gene

Paralogs for GC05M135339 Gene

No data available for Paralogs for GC05M135339 Gene

Variants for GC05M135339 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC05M135339 Gene

Disorders for GC05M135339 Gene

No disorders were found for GC05M135339 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC05M135339 Gene

Publications for GC05M135339 Gene

No publications were found for GC05M135339 Gene.

Products for GC05M135339 Gene

Sources for GC05M135339 Gene

Content
Loading form....