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Aliases for GC05M132664 Gene

Subcategory (RNA class) for GC05M132664 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for GC05M132664 Gene

No Aliases found

ORGUL Members for GC05M132664 Gene

No data available for External Ids for GC05M132664 Gene

Summaries for GC05M132664 Gene

GeneCards Summary for GC05M132664 Gene

GC05M132664 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC05M132664 Gene

  • mature_transcript: A transcript which has undergone the necessary modifications, if any, for its function. In eukaryotes this includes, for example, processing of introns, cleavage, base modification, and modifications to the 5' and/or the 3' ends, other than addition of bases. In bacteria functional mRNAs are usually not modified.

Additional gene information for GC05M132664 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC05M132664 Gene

Genomics for GC05M132664 Gene

GeneHancer (GH) Regulatory Elements for GC05M132664 Gene

Promoters and enhancers for GC05M132664 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J132662 Enhancer 1.4 FANTOM5 Ensembl ENCODE 650.7 +0.3 324 2.4 HDGF PKNOX1 ATF1 FOXA2 SMAD1 ARID4B YBX1 IRF4 ZNF48 ZNF766 GC05M132664 TH2LCRR RAD50 AFF4 IL4 ENSG00000224431 ZCCHC10 ENSG00000248648 IL13 CCNI2
GH05J132666 Enhancer 0.4 ENCODE 650.7 -1.7 -1701 0.1 IKZF1 CEBPB ZBTB33 GC05M132664 TH2LCRR IL4
GH05J132667 Enhancer 0.9 ENCODE 0.7 -2.3 -2300 0.9 HDGF SMAD1 ATF1 ARNT TCF12 POLR2B ZNF766 CBX5 GATA2 ATF7 RAD50 AFF4 IL4 ENSG00000224431 ZCCHC10 ENSG00000248648 GC05M132664
GH05J132673 Promoter 0.8 EPDnew 0.4 -9.6 -9639 0.1 L3MBTL2 GABPB1 SCRT2 ZNF592 MGA ZBTB17 IL4 GC05M132664
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC05M132664 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC05M132664 Gene

Genomic Locations for GC05M132664 Gene
chr5:132,664,107-132,664,331
(GRCh38/hg38)
Size:
225 bases
Orientation:
Minus strand

Genomic View for GC05M132664 Gene

Genes around GC05M132664 on UCSC Golden Path with GeneCards custom track

GC05M132664 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC05M132664 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC05M132664 Gene

Proteins for GC05M132664 Gene

Post-translational modifications for GC05M132664 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC05M132664 Gene

Domains & Families for GC05M132664 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC05M132664 Gene

Function for GC05M132664 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC05M132664 Gene

Localization for GC05M132664 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC05M132664 Gene

Pathways & Interactions for GC05M132664 Gene

SuperPathways for GC05M132664 Gene

No Data Available

Interacting Proteins for GC05M132664 Gene

Gene Ontology (GO) - Biological Process for GC05M132664 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC05M132664 Gene

Drugs & Compounds for GC05M132664 Gene

No Compound Related Data Available

Transcripts for GC05M132664 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC05M132664 Gene

No ASD Table

Relevant External Links for GC05M132664 Gene

GeneLoc Exon Structure for
GC05M132664

No data available for mRNA/cDNA for GC05M132664 Gene

Expression for GC05M132664 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC05M132664 Gene

Orthologs for GC05M132664 Gene

No data available for Orthologs and Evolution for GC05M132664 Gene

Paralogs for GC05M132664 Gene

No data available for Paralogs for GC05M132664 Gene

Variants for GC05M132664 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC05M132664 Gene

Disorders for GC05M132664 Gene

No disorders were found for GC05M132664 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC05M132664 Gene

Publications for GC05M132664 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  2. Identification of a conserved GATA3 response element upstream proximal from the interleukin-13 gene locus. (PMID: 12205084) Yamashita M … Nakayama T (The Journal of biological chemistry 2002) 1
  3. Deletion of a coordinate regulator of type 2 cytokine expression in mice. (PMID: 11526400) Mohrs M … Locksley RM (Nature immunology 2001) 1
  4. Identification of a coordinate regulator of interleukins 4, 13, and 5 by cross-species sequence comparisons. (PMID: 10753117) Loots GG … Frazer KA (Science (New York, N.Y.) 2000) 1

Products for GC05M132664 Gene

Sources for GC05M132664 Gene

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