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Aliases for GC05M116552 Gene

Subcategory (RNA class) for GC05M116552 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC05M116552 Gene

No Aliases found

ORGUL Members for GC05M116552 Gene

No data available for External Ids for GC05M116552 Gene

Summaries for GC05M116552 Gene

GeneCards Summary for GC05M116552 Gene

GC05M116552 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC05M116552 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC05M116552 Gene

Genomics for GC05M116552 Gene

GeneHancer (GH) Regulatory Elements for GC05M116552 Gene

Promoters and enhancers for GC05M116552 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J116554 Enhancer 0.8 Ensembl dbSUPER 650.7 -0.4 -412 0.2 SOX13 GATAD2A TFAP4 FOXA2 SAP130 FEZF1 ZNF644 POLR2A CEBPA FOXP1 GC05M116552 SEMA6A RPS14P8 GC05P116544
GH05J116553 Enhancer 0.5 ENCODE dbSUPER 650.7 +0.8 827 0.9 FEZF1 GC05M116552 SEMA6A SEMA6A-AS2 GC05P116544
GH05J116558 Promoter/Enhancer 1.4 EPDnew ENCODE dbSUPER 0.4 -5.4 -5388 2.1 SIN3A ZIC2 ETS1 ZNF324 POLR2A SCRT2 PRDM10 ATF7 ZBTB20 SCRT1 SEMA6A ATG12 RPS14P8 GC05M116552 GC05P116544
GH05J116542 Enhancer 1.1 ENCODE dbSUPER 0.4 +8.8 8814 6.5 FOXA2 FEZF1 ZNF2 ZNF280A TCF12 ZNF213 ZNF143 FOS NFKBIZ SP3 GC05P116544 SEMA6A-AS2 SEMA6A SEMA6A-AS1 GC05M116552
GH05J116550 Enhancer 0.5 dbSUPER 0.7 +3.8 3823 0.6 ZNF316 MAFF MAFG EMSY MAFK SEMA6A SEMA6A-AS2 SEMA6A-AS1 GC05M116552 GC05P116544
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC05M116552 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC05M116552 Gene

Genomic Locations for GC05M116552 Gene
chr5:116,552,270-116,554,489
(GRCh38/hg38)
Size:
2,220 bases
Orientation:
Minus strand

Genomic View for GC05M116552 Gene

Genes around GC05M116552 on UCSC Golden Path with GeneCards custom track

GC05M116552 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC05M116552 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC05M116552 Gene

Proteins for GC05M116552 Gene

Post-translational modifications for GC05M116552 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC05M116552 Gene

Domains & Families for GC05M116552 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC05M116552 Gene

Function for GC05M116552 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC05M116552 Gene

Localization for GC05M116552 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC05M116552 Gene

Pathways & Interactions for GC05M116552 Gene

SuperPathways for GC05M116552 Gene

No Data Available

Interacting Proteins for GC05M116552 Gene

Gene Ontology (GO) - Biological Process for GC05M116552 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC05M116552 Gene

Drugs & Compounds for GC05M116552 Gene

No Compound Related Data Available

Transcripts for GC05M116552 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC05M116552 Gene

No ASD Table

Relevant External Links for GC05M116552 Gene

GeneLoc Exon Structure for
GC05M116552

No data available for mRNA/cDNA for GC05M116552 Gene

Expression for GC05M116552 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC05M116552 Gene

Orthologs for GC05M116552 Gene

No data available for Orthologs and Evolution for GC05M116552 Gene

Paralogs for GC05M116552 Gene

No data available for Paralogs for GC05M116552 Gene

Variants for GC05M116552 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC05M116552 Gene

Disorders for GC05M116552 Gene

No disorders were found for GC05M116552 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC05M116552 Gene

Publications for GC05M116552 Gene

No publications were found for GC05M116552 Gene.

Products for GC05M116552 Gene

Sources for GC05M116552 Gene

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