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Aliases for GC05M115886 Gene

Subcategory (RNA class) for GC05M115886 Gene

miRNA

Quality Score for this RNA gene is

18

Aliases for GC05M115886 Gene

No Aliases found

No data available for External Ids for GC05M115886 Gene

Summaries for GC05M115886 Gene

GeneCards Summary for GC05M115886 Gene

GC05M115886 is an RNA Gene, and is affiliated with the miRNA class.

fRNAdb sequence ontologies for GC05M115886 Gene

  • miRNA: Small, ~22-nt, RNA molecule that is the endogenous transcript of a miRNA gene. Micro RNAs are produced from precursor molecules (SO:0000647) that can form local hairpin structures, which ordinarily are processed (via the Dicer pathway) such that a single miRNA molecule accumulates from one arm of a hairpin precursor molecule. Micro RNAs may trigger the cleavage of their target molecules or act as translational repressors.

Additional gene information for GC05M115886 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC05M115886 Gene

Genomics for GC05M115886 Gene

GeneHancer (GH) Regulatory Elements for GC05M115886 Gene

Promoters and enhancers for GC05M115886 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J115884 Enhancer 0.7 ENCODE 650.7 +0.9 893 1.5 FOXA2 MAX ZNF644 RAD21 YY1 HNF4G HOMEZ MIXL1 RXRA NFIA GC05M115886 AP3S1 ATG12 LVRN TMED7-TICAM2 TMED7 CDO1 ENSG00000251118 RNU2-49P
GH05J115838 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.3 +44.1 44139 6.3 MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 E2F8 ZNF143 SP3 ATG12 AP3S1 CDO1 ENSG00000250015 PGGT1B SEMA6A-AS1 GC05M115886
GH05J115927 Enhancer 1.1 FANTOM5 ENCODE 0.3 -44.0 -44016 4.6 ZNF473 INSM2 KLF17 KLF14 TCF12 ZNF23 ZNF366 SCRT2 ZNF416 ZNF207 GC05M115931 ENSG00000250015 SEMA6A-AS1 ATG12 LVRN PGGT1B GC05M115886
GH05J115856 Enhancer 1 Ensembl ENCODE 0.3 +28.9 28923 2.1 PKNOX1 FOXA2 ARNT NFIB ZNF133 MZF1 FEZF1 ZNF2 YY1 ZNF366 ENSG00000250015 PGGT1B AP3S1 CDO1 ATG12 GC05M115886
GH05J115869 Enhancer 0.5 FANTOM5 0.4 +16.8 16757 0.4 ZNF146 CEBPB FEZF1 ZXDB AP3S1 ATG12 LVRN FEM1C GC05M115886
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC05M115886 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC05M115886 Gene

Genomic Locations for GC05M115886 Gene
chr5:115,886,243-115,886,265
(GRCh38/hg38)
Size:
23 bases
Orientation:
Minus strand

Genomic View for GC05M115886 Gene

Genes around GC05M115886 on UCSC Golden Path with GeneCards custom track

GC05M115886 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC05M115886 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC05M115886 Gene

ORGUL Member Location for GC05M115886 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC05M115886 Gene

Proteins for GC05M115886 Gene

Post-translational modifications for GC05M115886 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC05M115886 Gene

Domains & Families for GC05M115886 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC05M115886 Gene

Function for GC05M115886 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC05M115886 Gene

Localization for GC05M115886 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC05M115886 Gene

Pathways & Interactions for GC05M115886 Gene

SuperPathways for GC05M115886 Gene

No Data Available

Interacting Proteins for GC05M115886 Gene

Gene Ontology (GO) - Biological Process for GC05M115886 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC05M115886 Gene

Drugs & Compounds for GC05M115886 Gene

No Compound Related Data Available

Transcripts for GC05M115886 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC05M115886 Gene

No ASD Table

Relevant External Links for GC05M115886 Gene

GeneLoc Exon Structure for
GC05M115886

No data available for mRNA/cDNA for GC05M115886 Gene

Expression for GC05M115886 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC05M115886 Gene

Orthologs for GC05M115886 Gene

No data available for Orthologs and Evolution for GC05M115886 Gene

Paralogs for GC05M115886 Gene

No data available for Paralogs for GC05M115886 Gene

Variants for GC05M115886 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC05M115886 Gene

Disorders for GC05M115886 Gene

No disorders were found for GC05M115886 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC05M115886 Gene

Publications for GC05M115886 Gene

No publications were found for GC05M115886 Gene.

Products for GC05M115886 Gene

Sources for GC05M115886 Gene

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