Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC04P006842 Gene

Subcategory (RNA class) for GC04P006842 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC04P006842 Gene

No Aliases found

ORGUL Members for GC04P006842 Gene

No data available for External Ids for GC04P006842 Gene

Summaries for GC04P006842 Gene

GeneCards Summary for GC04P006842 Gene

GC04P006842 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC04P006842 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC04P006842 Gene

Genomics for GC04P006842 Gene

GeneHancer (GH) Regulatory Elements for GC04P006842 Gene

Promoters and enhancers for GC04P006842 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J006839 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 -2.3 -2320 1 HDGF HDAC1 PKNOX1 ATF1 FEZF1 EGR1 EGR2 RXRA REST NR2F2 KIAA0232 GC04P006842
GH04J006855 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +13.6 13617 1.7 PKNOX1 ATF1 SMAD1 IRF4 NCOA2 ZNF207 ATF7 FOS RUNX3 RXRA GC04P006857 KIAA0232 LINC02482 LOC93622 MRFAP1L1 BLOC1S4 GC04P006842
GH04J006781 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.2 -59.9 -59873 3.2 PKNOX1 SMAD1 ARID4B SIN3A DMAP1 POLR2B ZNF207 ZNF143 SP3 SP5 KIAA0232 TADA2B TBC1D14 GC04P006772 GC04P006842
GH04J006806 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -34.9 -34902 3.2 HDAC1 LEF1 TAL1 FOSL1 TCF12 GATA3 ZNF316 NCOR1 CBFA2T2 FOS KIAA0232 TBC1D14 TADA2B GC04P006842
GH04J006854 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +11.9 11897 0.4 PKNOX1 ZNF687 MAX EBF1 DPF2 IKZF1 NBN SPI1 GC04P006857 GC04P006842 KIAA0232
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC04P006842 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC04P006842 Gene

Genomic Locations for GC04P006842 Gene
chr4:6,842,503-6,844,639
(GRCh38/hg38)
Size:
2,137 bases
Orientation:
Plus strand

Genomic View for GC04P006842 Gene

Genes around GC04P006842 on UCSC Golden Path with GeneCards custom track

GC04P006842 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC04P006842 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC04P006842 Gene

Proteins for GC04P006842 Gene

Post-translational modifications for GC04P006842 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC04P006842 Gene

Domains & Families for GC04P006842 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC04P006842 Gene

Function for GC04P006842 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC04P006842 Gene

Localization for GC04P006842 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC04P006842 Gene

Pathways & Interactions for GC04P006842 Gene

SuperPathways for GC04P006842 Gene

No Data Available

Interacting Proteins for GC04P006842 Gene

Gene Ontology (GO) - Biological Process for GC04P006842 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC04P006842 Gene

Drugs & Compounds for GC04P006842 Gene

No Compound Related Data Available

Transcripts for GC04P006842 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC04P006842 Gene

No ASD Table

Relevant External Links for GC04P006842 Gene

GeneLoc Exon Structure for
GC04P006842

No data available for mRNA/cDNA for GC04P006842 Gene

Expression for GC04P006842 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC04P006842 Gene

Orthologs for GC04P006842 Gene

No data available for Orthologs and Evolution for GC04P006842 Gene

Paralogs for GC04P006842 Gene

No data available for Paralogs for GC04P006842 Gene

Variants for GC04P006842 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC04P006842 Gene

Disorders for GC04P006842 Gene

No disorders were found for GC04P006842 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC04P006842 Gene

Publications for GC04P006842 Gene

No publications were found for GC04P006842 Gene.

Products for GC04P006842 Gene

Sources for GC04P006842 Gene

Content
Loading form....