Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC04M095163 Gene

Subcategory (RNA class) for GC04M095163 Gene

lncRNA

Quality Score for this RNA gene is

0.2

Aliases for GC04M095163 Gene

No Aliases found

ORGUL Members for GC04M095163 Gene

No data available for External Ids for GC04M095163 Gene

Summaries for GC04M095163 Gene

GeneCards Summary for GC04M095163 Gene

GC04M095163 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC04M095163 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC04M095163

Additional gene information for GC04M095163 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC04M095163 Gene

Genomics for GC04M095163 Gene

GeneHancer (GH) Regulatory Elements for GC04M095163 Gene

Promoters and enhancers for GC04M095163 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I095166 Enhancer 0.8 ENCODE dbSUPER 550.8 +1.5 1454 0.2 CTCF ZNF654 TRIM22 REST RAD21 ARID2 SCRT2 SMC3 ZNF143 GC04M095163 GC04P094910 UNC5C
GH04I095155 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +11.2 11239 1.1 MEIS2 CTCF PKNOX1 ZNF654 TRIM22 ZNF384 REST RAD21 ZNF143 BMPR1B GC04M095163 GC04P094910
GH04I095128 Enhancer 1 Ensembl ENCODE 0.3 +37.4 37428 2.5 ZNF146 NFIB JUN SIN3A CEBPG FEZF1 FOSL1 ZNF366 POLR2A PRDM10 BMPR1B GC04M095163 GC04P094910
GH04I095157 Enhancer 0.5 dbSUPER 0.4 +6.0 5995 8.2 CTCF MAFG NFE2 MLLT1 ATF2 BMPR1B GC04M095163 GC04P094910 UNC5C
GH04I095092 Promoter/Enhancer 0.8 EPDnew dbSUPER 0.2 +76.2 76162 0.1 SIN3A BMPR1B GC04M095163 GC04P094910
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC04M095163 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC04M095163 Gene

Genomic Locations for GC04M095163 Gene
chr4:95,162,508-95,167,599
(GRCh38/hg38)
Size:
5,092 bases
Orientation:
Minus strand

Genomic View for GC04M095163 Gene

Genes around GC04M095163 on UCSC Golden Path with GeneCards custom track

GC04M095163 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC04M095163 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC04M095163 Gene

ORGUL Member Location for GC04M095163 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC04M095163 Gene

Proteins for GC04M095163 Gene

Post-translational modifications for GC04M095163 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC04M095163 Gene

Domains & Families for GC04M095163 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC04M095163 Gene

Function for GC04M095163 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC04M095163 Gene

Localization for GC04M095163 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC04M095163 Gene

Pathways & Interactions for GC04M095163 Gene

SuperPathways for GC04M095163 Gene

No Data Available

Interacting Proteins for GC04M095163 Gene

Gene Ontology (GO) - Biological Process for GC04M095163 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC04M095163 Gene

Drugs & Compounds for GC04M095163 Gene

No Compound Related Data Available

Transcripts for GC04M095163 Gene

fRNAdb Secondary structures for GC04M095163 Gene

  • FR382255

Alternative Splicing Database (ASD) splice patterns (SP) for GC04M095163 Gene

No ASD Table

Relevant External Links for GC04M095163 Gene

GeneLoc Exon Structure for
GC04M095163

No data available for mRNA/cDNA for GC04M095163 Gene

Expression for GC04M095163 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC04M095163 Gene

Orthologs for GC04M095163 Gene

No data available for Orthologs and Evolution for GC04M095163 Gene

Paralogs for GC04M095163 Gene

No data available for Paralogs for GC04M095163 Gene

Variants for GC04M095163 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC04M095163 Gene

Disorders for GC04M095163 Gene

No disorders were found for GC04M095163 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC04M095163 Gene

Publications for GC04M095163 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC04M095163 Gene

Sources for GC04M095163 Gene

Content
Loading form....