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Aliases for GC04M003368 Gene

Subcategory (RNA class) for GC04M003368 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for GC04M003368 Gene

No Aliases found

ORGUL Members for GC04M003368 Gene

No data available for External Ids for GC04M003368 Gene

Summaries for GC04M003368 Gene

GeneCards Summary for GC04M003368 Gene

GC04M003368 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC04M003368 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC04M003368 Gene

Genomics for GC04M003368 Gene

GeneHancer (GH) Regulatory Elements for GC04M003368 Gene

Promoters and enhancers for GC04M003368 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I003368 Promoter/Enhancer 1.9 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 550.8 -1.8 -1770 3.1 RING1 MXI1 KLF1 ZBTB21 JUN MAX SIN3A BMI1 FEZF1 ZIC2 RGS12 GC04M003368 PIR55428 NOP14-AS1 TMEM128 FAM193A ZBTB49 PIR36896
GH04I003354 Enhancer 1 Ensembl ENCODE 0.4 +13.3 13304 1 BACH1 BATF KLF5 THRB YY1 TEAD3 SLC30A9 RFXANK ZNF207 ZNF143 MSANTD1 GC04M003368 RPL7AP29 RGS12
GH04I003341 Enhancer 1.1 Ensembl ENCODE 0.3 +26.0 26019 1.6 ELF3 FOXA2 MLX ARID4B RAD21 DNMT3B ZSCAN9 RARA ZNF366 FOS MSANTD1 RPL7AP29 GC04M003368 RGS12
GH04I003363 Enhancer 0.3 Ensembl 0.8 +4.8 4776 0.2 MAX GC04M003368 RPL7AP29 RGS12
GH04I003346 Enhancer 0.8 Ensembl 0.3 +22.4 22376 0.6 SOX13 CTCF SAP130 ARID4B CEBPG RAD21 YY1 SMC3 ZNF143 PRDM10 RGS12 GC04M003368 RPL7AP29
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC04M003368 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC04M003368 Gene

Genomic Locations for GC04M003368 Gene
chr4:3,368,569-3,368,677
(GRCh38/hg38)
Size:
109 bases
Orientation:
Minus strand

Genomic View for GC04M003368 Gene

Genes around GC04M003368 on UCSC Golden Path with GeneCards custom track

GC04M003368 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC04M003368 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC04M003368 Gene

Proteins for GC04M003368 Gene

Post-translational modifications for GC04M003368 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC04M003368 Gene

Domains & Families for GC04M003368 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC04M003368 Gene

Function for GC04M003368 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC04M003368 Gene

Localization for GC04M003368 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC04M003368 Gene

Pathways & Interactions for GC04M003368 Gene

SuperPathways for GC04M003368 Gene

No Data Available

Interacting Proteins for GC04M003368 Gene

Gene Ontology (GO) - Biological Process for GC04M003368 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC04M003368 Gene

Drugs & Compounds for GC04M003368 Gene

No Compound Related Data Available

Transcripts for GC04M003368 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC04M003368 Gene

No ASD Table

Relevant External Links for GC04M003368 Gene

GeneLoc Exon Structure for
GC04M003368

No data available for mRNA/cDNA for GC04M003368 Gene

Expression for GC04M003368 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC04M003368 Gene

Orthologs for GC04M003368 Gene

No data available for Orthologs and Evolution for GC04M003368 Gene

Paralogs for GC04M003368 Gene

No data available for Paralogs for GC04M003368 Gene

Variants for GC04M003368 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC04M003368 Gene

Disorders for GC04M003368 Gene

No disorders were found for GC04M003368 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC04M003368 Gene

Publications for GC04M003368 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

Products for GC04M003368 Gene

Sources for GC04M003368 Gene

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