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Aliases for GC04M001683 Gene

Subcategory (RNA class) for GC04M001683 Gene


Quality Score for this RNA gene is


Aliases for GC04M001683 Gene

No Aliases found

ORGUL Members for GC04M001683 Gene

No data available for External Ids for GC04M001683 Gene

Summaries for GC04M001683 Gene

GeneCards Summary for GC04M001683 Gene

GC04M001683 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC04M001683 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC04M001683 Gene

Genomics for GC04M001683 Gene

GeneHancer (GH) Regulatory Elements for GC04M001683 Gene

Promoters and enhancers for GC04M001683 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J001682 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 600.7 -1.0 -971 3.4 ZFX ZNF148 NKRF ZNF687 NCOA6 TRIM24 MLLT1 ZNF639 GLIS2 POLR2A FAM53A ENSG00000207009 GC04M001683 PIR55509 ENSG00000270195 SLBP TMEM129 GC04P001691
GH04J001676 Enhancer 0.7 Ensembl 0.4 +6.7 6661 0.7 BACH1 MAFK SMARCA4 GMEB1 DPF2 NFE2L2 ATF1 PKNOX1 ZNF316 CTBP1 FAM53A GC04M001683 ENSG00000207009 LOC105374349
GH04J001680 Enhancer 0.3 Ensembl 0.7 +3.2 3228 0.2 ZNF600 ENSG00000207009 FAM53A GC04M001683 LOC105374349
GH04J001629 Enhancer 0.7 Ensembl 0.2 +54.3 54301 1 CC2D1A CTCF ZBTB7A RAD21 GLIS2 ARID2 ZIC2 ZNF143 REST ZNF692 LOC105374349 FAM53A GC04M001683 ENSG00000207009
GH04J001644 Enhancer 0.6 Ensembl ENCODE 0.3 +38.2 38224 1.7 SP1 ZNF341 FAM53A TMEM129 LOC105374349 ENSG00000207009 GC04M001683
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC04M001683 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC04M001683 Gene

Genomic Locations for GC04M001683 Gene
109 bases
Minus strand

Genomic View for GC04M001683 Gene

Genes around GC04M001683 on UCSC Golden Path with GeneCards custom track

GC04M001683 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC04M001683 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC04M001683 Gene

Proteins for GC04M001683 Gene

Post-translational modifications for GC04M001683 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC04M001683 Gene

Domains & Families for GC04M001683 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC04M001683 Gene

Function for GC04M001683 Gene

Phenotypes From GWAS Catalog for GC04M001683 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC04M001683 Gene

Localization for GC04M001683 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC04M001683 Gene

Pathways & Interactions for GC04M001683 Gene

PathCards logo

SuperPathways for GC04M001683 Gene

No Data Available

Interacting Proteins for GC04M001683 Gene

Gene Ontology (GO) - Biological Process for GC04M001683 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC04M001683 Gene

Drugs & Compounds for GC04M001683 Gene

No Compound Related Data Available

Transcripts for GC04M001683 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC04M001683 Gene

No ASD Table

Relevant External Links for GC04M001683 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC04M001683 Gene

Expression for GC04M001683 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC04M001683 Gene

Orthologs for GC04M001683 Gene

No data available for Orthologs and Evolution for GC04M001683 Gene

Paralogs for GC04M001683 Gene

No data available for Paralogs for GC04M001683 Gene

Variants for GC04M001683 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC04M001683 Gene

Disorders for GC04M001683 Gene

No disorders were found for GC04M001683 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC04M001683 Gene

Publications for GC04M001683 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

No data available for External Links for GC04M001683 Gene

Products for GC04M001683 Gene

Sources for GC04M001683 Gene

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