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Aliases for GC02P233277 Gene

Subcategory (RNA class) for GC02P233277 Gene


Quality Score for this RNA gene is


Aliases for GC02P233277 Gene

No Aliases found

ORGUL Members for GC02P233277 Gene

No data available for External Ids for GC02P233277 Gene

Summaries for GC02P233277 Gene

GeneCards Summary for GC02P233277 Gene

GC02P233277 is an RNA Gene, and is affiliated with the scaRNA class.

fRNAdb sequence ontologies for GC02P233277 Gene

  • snoRNA: A snoRNA (small nucleolar RNA) is any one of a class of small RNAs that are associated with the eukaryotic nucleus as components of small nucleolar ribonucleoproteins. They participate in the processing or modifications of many RNAs, mostly ribosomal RNAs (rRNAs) though snoRNAs are also known to target other classes of RNA, including spliceosomal RNAs, tRNAs, and mRNAs via a stretch of sequence that is complementary to a sequence in the targeted RNA.

Additional gene information for GC02P233277 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC02P233277 Gene

Genomics for GC02P233277 Gene

GeneHancer (GH) Regulatory Elements for GC02P233277 Gene

Promoters and enhancers for GC02P233277 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J233249 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.3 -24.1 -24082 3.6 HDGF PKNOX1 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ATG16L1 GC02P233277
GH02J233246 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -28.0 -28034 1.6 PKNOX1 JUN SIN3A RFX5 FOSL1 CTBP1 FOSL2 FOS RCOR1 ETV6 ATG16L1 DGKD INPP5D GC02P233277
GH02J233266 Enhancer 0.9 ENCODE dbSUPER 0.4 -6.3 -6330 6.1 HDGF FOXA2 ZFHX2 GATA3 EGR1 SCRT2 EED ATF7 BCLAF1 IKZF2 ATG16L1 SAG KCNJ13 GIGYF2 GC02P233277
GH02J233240 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 -33.9 -33871 2.5 SRF KLF1 CBFB NR2F1 JUN ZEB2 ELF1 DPF2 IKZF1 ETV6 ATG16L1 SCARNA5 GC02P233277
GH02J233261 Enhancer 0.7 ENCODE dbSUPER 0.4 -13.4 -13448 1.4 JUNB EBF1 MNT BATF BCLAF1 RUNX3 ATG16L1 GC02P233277
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC02P233277 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC02P233277 Gene

Genomic Locations for GC02P233277 Gene
279 bases
Plus strand

Genomic View for GC02P233277 Gene

Genes around GC02P233277 on UCSC Golden Path with GeneCards custom track

GC02P233277 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC02P233277 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC02P233277 Gene

Proteins for GC02P233277 Gene

Post-translational modifications for GC02P233277 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC02P233277 Gene

Domains & Families for GC02P233277 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC02P233277 Gene

Function for GC02P233277 Gene

Phenotypes From GWAS Catalog for GC02P233277 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC02P233277 Gene

Localization for GC02P233277 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC02P233277 Gene

Pathways & Interactions for GC02P233277 Gene

SuperPathways for GC02P233277 Gene

No Data Available

Interacting Proteins for GC02P233277 Gene

Gene Ontology (GO) - Biological Process for GC02P233277 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC02P233277 Gene

Drugs & Compounds for GC02P233277 Gene

No Compound Related Data Available

Transcripts for GC02P233277 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC02P233277 Gene

No ASD Table

Relevant External Links for GC02P233277 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC02P233277 Gene

Expression for GC02P233277 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC02P233277 Gene

Orthologs for GC02P233277 Gene

No data available for Orthologs and Evolution for GC02P233277 Gene

Paralogs for GC02P233277 Gene

No data available for Paralogs for GC02P233277 Gene

Variants for GC02P233277 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC02P233277 Gene

Disorders for GC02P233277 Gene

No disorders were found for GC02P233277 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC02P233277 Gene

Publications for GC02P233277 Gene

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L … Weber MJ (Nucleic acids research 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Cajal body-specific small nuclear RNAs: a novel class of 2'-O-methylation and pseudouridylation guide RNAs. (PMID: 12032087) Darzacq X … Kiss T (The EMBO journal 2002) 1
  4. U87 RNA, a novel C/D box small nucleolar RNA from mammalian cells. (PMID: 12119114) Gogolevskaya IK … Kramerov DA (Gene 2002) 1
  5. The nuclear 5S RNAs from chicken, rat and man. U5 RNAs are encoded by multiple genes. (PMID: 6164980) Krol A … Branlant C (Nucleic acids research 1981) 1

Products for GC02P233277 Gene

Sources for GC02P233277 Gene

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