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Aliases for GC02P220077 Gene

Subcategory (RNA class) for GC02P220077 Gene

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Quality Score for this RNA gene is

10.4

Aliases for GC02P220077 Gene

No Aliases found

ORGUL Members for GC02P220077 Gene

No data available for External Ids for GC02P220077 Gene

Summaries for GC02P220077 Gene

GeneCards Summary for GC02P220077 Gene

GC02P220077 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC02P220077 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC02P220077

Additional gene information for GC02P220077 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC02P220077 Gene

Genomics for GC02P220077 Gene

GeneHancer (GH) Regulatory Elements for GC02P220077 Gene

Promoters and enhancers for GC02P220077 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I220076 Enhancer 0.9 Ensembl ENCODE 550.8 +0.4 414 1.9 CTCF PKNOX1 NFIB MZF1 FEZF1 ZIC2 E4F1 GATA3 FOSL2 FOS GC02P220077 ENSG00000239498
GH02I220082 Enhancer 0.4 ENCODE 0.8 +4.8 4830 0.1 GATA3 TCF7L2 GC02P220077 ENSG00000239498
GH02I220080 Enhancer 0.3 ENCODE 0.8 +4.0 3992 0.9 ZSCAN4 ENSG00000236451 GC02P220077 ENSG00000239498
GH02I220090 Enhancer 0.5 ENCODE 0.4 +12.9 12919 0.2 CTCF JUND GATA3 NFE2 GC02P220077 ENSG00000239498
GH02I220081 Enhancer 0.2 ENCODE 0.8 +3.4 3401 0.1 GC02P220077 ENSG00000239498
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC02P220077 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC02P220077 Gene

Genomic Locations for GC02P220077 Gene
chr2:220,077,356-220,077,535
(GRCh38/hg38)
Size:
180 bases
Orientation:
Plus strand

Genomic View for GC02P220077 Gene

Genes around GC02P220077 on UCSC Golden Path with GeneCards custom track

GC02P220077 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC02P220077 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC02P220077 Gene

ORGUL Member Location for GC02P220077 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC02P220077 Gene

Proteins for GC02P220077 Gene

Post-translational modifications for GC02P220077 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC02P220077 Gene

Domains & Families for GC02P220077 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC02P220077 Gene

Function for GC02P220077 Gene

Animal Model Products

miRNA for GC02P220077 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC02P220077 Gene

Localization for GC02P220077 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC02P220077 Gene

Pathways & Interactions for GC02P220077 Gene

SuperPathways for GC02P220077 Gene

No Data Available

Interacting Proteins for GC02P220077 Gene

Gene Ontology (GO) - Biological Process for GC02P220077 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC02P220077 Gene

Drugs & Compounds for GC02P220077 Gene

No Compound Related Data Available

Transcripts for GC02P220077 Gene

fRNAdb Secondary structures for GC02P220077 Gene

  • FR184115

Alternative Splicing Database (ASD) splice patterns (SP) for GC02P220077 Gene

No ASD Table

Relevant External Links for GC02P220077 Gene

GeneLoc Exon Structure for
GC02P220077

No data available for mRNA/cDNA for GC02P220077 Gene

Expression for GC02P220077 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC02P220077 Gene

Orthologs for GC02P220077 Gene

No data available for Orthologs and Evolution for GC02P220077 Gene

Paralogs for GC02P220077 Gene

No data available for Paralogs for GC02P220077 Gene

Variants for GC02P220077 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC02P220077 Gene

Disorders for GC02P220077 Gene

No disorders were found for GC02P220077 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC02P220077 Gene

Publications for GC02P220077 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC02P220077 Gene

Sources for GC02P220077 Gene

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