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Aliases for GC02P216342 Gene

Subcategory (RNA class) for GC02P216342 Gene

lncRNA

Quality Score for this RNA gene is

11

Aliases for GC02P216342 Gene

No Aliases found

No data available for External Ids for GC02P216342 Gene

Summaries for GC02P216342 Gene

GeneCards Summary for GC02P216342 Gene

GC02P216342 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC02P216342 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

View fRNAdb secondary structures for GC02P216342

Additional gene information for GC02P216342 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC02P216342 Gene

Genomics for GC02P216342 Gene

GeneHancer (GH) Regulatory Elements for GC02P216342 Gene

Promoters and enhancers for GC02P216342 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I216339 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 550.8 +1.8 1820 7.7 KLF1 PKNOX1 FOXA2 ZIC2 ETS1 ZFHX2 EGR1 POLR2A EGR2 REST GC02P216342 GC02P216343 MARCH4 SMARCAL1 ENSG00000235042 GC02P216352
GH02I216315 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.3 -24.9 -24924 2.5 JUN ETV1 ZIC2 FOSL1 ZNF316 POLR2A RCOR1 FOSL2 FOS NFE2 MARCH4 ENSG00000233581 GC02P216342 GC02P216343
GH02I216308 Enhancer 0.9 FANTOM5 ENCODE 0.3 -32.6 -32570 1.2 MEIS2 PKNOX1 ATF1 ZBTB21 ZNF189 OVOL3 TSHZ1 ZNF843 ATF2 OSR2 MARCH4 ENSG00000231092 SMARCAL1 ENSG00000235042 ENSG00000233581 GC02P216342 GC02P216343
GH02I216319 Enhancer 0.3 ENCODE 0.3 -21.3 -21298 0.3 SIN3A MARCH4 ENSG00000231092 ENSG00000233581 GC02P216342 GC02P216343
GH02I216318 Enhancer 0.2 ENCODE 0.3 -22.6 -22562 0.2 MARCH4 ENSG00000231092 ENSG00000233581 GC02P216342 GC02P216343
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC02P216342 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC02P216342 Gene

Genomic Locations for GC02P216342 Gene
chr2:216,341,235-216,342,869
(GRCh38/hg38)
Size:
1,635 bases
Orientation:
Plus strand

Genomic View for GC02P216342 Gene

Genes around GC02P216342 on UCSC Golden Path with GeneCards custom track

GC02P216342 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC02P216342 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC02P216342 Gene

ORGUL Member Location for GC02P216342 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC02P216342 Gene

Proteins for GC02P216342 Gene

Post-translational modifications for GC02P216342 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC02P216342 Gene

Domains & Families for GC02P216342 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC02P216342 Gene

Function for GC02P216342 Gene

Phenotypes From GWAS Catalog for GC02P216342 Gene

Animal Model Products

miRNA for GC02P216342 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC02P216342 Gene

Localization for GC02P216342 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC02P216342 Gene

Pathways & Interactions for GC02P216342 Gene

SuperPathways for GC02P216342 Gene

No Data Available

Interacting Proteins for GC02P216342 Gene

Gene Ontology (GO) - Biological Process for GC02P216342 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC02P216342 Gene

Drugs & Compounds for GC02P216342 Gene

No Compound Related Data Available

Transcripts for GC02P216342 Gene

fRNAdb Secondary structures for GC02P216342 Gene

  • FR338235

Alternative Splicing Database (ASD) splice patterns (SP) for GC02P216342 Gene

No ASD Table

Relevant External Links for GC02P216342 Gene

GeneLoc Exon Structure for
GC02P216342

No data available for mRNA/cDNA for GC02P216342 Gene

Expression for GC02P216342 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC02P216342 Gene

Orthologs for GC02P216342 Gene

No data available for Orthologs and Evolution for GC02P216342 Gene

Paralogs for GC02P216342 Gene

No data available for Paralogs for GC02P216342 Gene

Variants for GC02P216342 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC02P216342 Gene

Disorders for GC02P216342 Gene

No disorders were found for GC02P216342 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC02P216342 Gene

Publications for GC02P216342 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC02P216342 Gene

Sources for GC02P216342 Gene

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