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Aliases for GC02P202277 Gene

Subcategory (RNA class) for GC02P202277 Gene

snoRNA

Quality Score for this RNA gene is

4

Aliases for GC02P202277 Gene

No Aliases found

ORGUL Members for GC02P202277 Gene

No data available for External Ids for GC02P202277 Gene

Summaries for GC02P202277 Gene

GeneCards Summary for GC02P202277 Gene

GC02P202277 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC02P202277 Gene

  • C_D_box_snoRNA: Most box C/D snoRNAs also contain long (>10 nt) sequences complementary to rRNA. Boxes C and D, as well as boxes C' and D', are usually located in close proximity, and form a structure known as the box C/D motif. This motif is important for snoRNA stability, processing, nucleolar targeting and function. A small number of box C/D snoRNAs are involved in rRNA processing; most, however, are known or predicted to serve as guide RNAs in ribose methylation of rRNA. Targeting involves direct base pairing of the snoRNA at the rRNA site to be modified and selection of a rRNA nucleotide a fixed distance from box D or D'.

Additional gene information for GC02P202277 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC02P202277 Gene

Genomics for GC02P202277 Gene

GeneHancer (GH) Regulatory Elements for GC02P202277 Gene

Promoters and enhancers for GC02P202277 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I202277 Enhancer 1 ENCODE dbSUPER 550.8 +2.0 1979 2.1 FOXA2 RAD21 ZNF335 ZNF366 FOS IKZF2 SMARCA5 ZNF654 ZNF362 CEBPB GC02P202277 GC02P202279 SNORD70 ENSG00000212309 NBEAL1 ALS2 GC02P202292 NOP58
GH02I202275 Enhancer 0.6 ENCODE dbSUPER 550.8 0.0 -37 1.2 ZNF280D CEBPA PIR47513 SNORD70 GC02P202279 GC02P202277 ENSG00000212309 NOP58
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC02P202277 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC02P202277 Gene

Genomic Locations for GC02P202277 Gene
chr2:202,276,430-202,276,518
(GRCh38/hg38)
Size:
89 bases
Orientation:
Plus strand

Genomic View for GC02P202277 Gene

Genes around GC02P202277 on UCSC Golden Path with GeneCards custom track

GC02P202277 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC02P202277 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC02P202277 Gene

Proteins for GC02P202277 Gene

Post-translational modifications for GC02P202277 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC02P202277 Gene

Domains & Families for GC02P202277 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC02P202277 Gene

Function for GC02P202277 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC02P202277 Gene

Localization for GC02P202277 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC02P202277 Gene

Pathways & Interactions for GC02P202277 Gene

SuperPathways for GC02P202277 Gene

No Data Available

Interacting Proteins for GC02P202277 Gene

Gene Ontology (GO) - Biological Process for GC02P202277 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC02P202277 Gene

Drugs & Compounds for GC02P202277 Gene

No Compound Related Data Available

Transcripts for GC02P202277 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC02P202277 Gene

No ASD Table

Relevant External Links for GC02P202277 Gene

GeneLoc Exon Structure for
GC02P202277

No data available for mRNA/cDNA for GC02P202277 Gene

Expression for GC02P202277 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC02P202277 Gene

Orthologs for GC02P202277 Gene

No data available for Orthologs and Evolution for GC02P202277 Gene

Paralogs for GC02P202277 Gene

No data available for Paralogs for GC02P202277 Gene

Variants for GC02P202277 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC02P202277 Gene

Disorders for GC02P202277 Gene

No disorders were found for GC02P202277 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC02P202277 Gene

Publications for GC02P202277 Gene

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L … Weber MJ (Nucleic acids research 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. (PMID: 11387227) Hüttenhofer A … Brosius J (The EMBO journal 2001) 1

Products for GC02P202277 Gene

Sources for GC02P202277 Gene

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