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Aliases for GC02P201933 Gene

Subcategory (RNA class) for GC02P201933 Gene

snRNA

Quality Score for this RNA gene is

12

Aliases for GC02P201933 Gene

No Aliases found

ORGUL Members for GC02P201933 Gene

No data available for External Ids for GC02P201933 Gene

Summaries for GC02P201933 Gene

GeneCards Summary for GC02P201933 Gene

GC02P201933 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC02P201933 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

Additional gene information for GC02P201933 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC02P201933 Gene

Genomics for GC02P201933 Gene

GeneHancer (GH) Regulatory Elements for GC02P201933 Gene

Promoters and enhancers for GC02P201933 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I201931 Enhancer 0.8 Ensembl ENCODE 0.4 +6.0 6024 3.3 PKNOX1 ZNF189 ZIC2 OSR2 ZNF121 ZNF341 GLIS1 TRIM28 EZH2 GC02P201933 GC02P202013
GH02I201936 Enhancer 0.7 ENCODE 0.4 +10.3 10281 3 ELF3 GATAD2A USF1 HLF CEBPB USF2 CEBPG ZNF644 TGIF2 NFIL3 GC02P201933 GC02P202013
GH02I201967 Enhancer 0.7 FANTOM5 dbSUPER 0.3 +39.7 39749 0.2 ZFHX2 POLR2A RCOR1 CHD2 EGR2 RNU6-440P KIAA2012 CDK15 ALS2 GC02P201933 GC02P202013
GH02I201971 Enhancer 1 Ensembl ENCODE dbSUPER 0.2 +45.2 45189 2.5 MAX SIN3A ETS1 SP1 JUND POLR2A CTBP2 POU5F1 FOS MAFK RNU6-440P KIAA2012 LOC729224 CDK15 MPP4 GC02P202013 GC02P201933
GH02I201949 Enhancer 0.6 ENCODE 0.3 +22.4 22379 1.5 USF1 MAX USF2 ATF2 E2F1 GATA3 POLR2A ZBTB48 RCOR1 ATF7 GC02P201933 GC02P202013
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC02P201933 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC02P201933 Gene

Genomic Locations for GC02P201933 Gene
chr2:201,927,447-201,927,543
(GRCh38/hg38)
Size:
97 bases
Orientation:
Plus strand

Genomic View for GC02P201933 Gene

Genes around GC02P201933 on UCSC Golden Path with GeneCards custom track

GC02P201933 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC02P201933 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC02P201933 Gene

Proteins for GC02P201933 Gene

Post-translational modifications for GC02P201933 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC02P201933 Gene

Domains & Families for GC02P201933 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC02P201933 Gene

Function for GC02P201933 Gene

Phenotypes From GWAS Catalog for GC02P201933 Gene

Animal Model Products

miRNA for GC02P201933 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC02P201933 Gene

Localization for GC02P201933 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC02P201933 Gene

Pathways & Interactions for GC02P201933 Gene

SuperPathways for GC02P201933 Gene

No Data Available

Interacting Proteins for GC02P201933 Gene

Gene Ontology (GO) - Biological Process for GC02P201933 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC02P201933 Gene

Drugs & Compounds for GC02P201933 Gene

No Compound Related Data Available

Transcripts for GC02P201933 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC02P201933 Gene

No ASD Table

Relevant External Links for GC02P201933 Gene

GeneLoc Exon Structure for
GC02P201933

No data available for mRNA/cDNA for GC02P201933 Gene

Expression for GC02P201933 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC02P201933 Gene

Orthologs for GC02P201933 Gene

No data available for Orthologs and Evolution for GC02P201933 Gene

Paralogs for GC02P201933 Gene

No data available for Paralogs for GC02P201933 Gene

Variants for GC02P201933 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC02P201933 Gene

Disorders for GC02P201933 Gene

No disorders were found for GC02P201933 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC02P201933 Gene

Publications for GC02P201933 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H … Engberg J (Journal of molecular biology 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

Products for GC02P201933 Gene

Sources for GC02P201933 Gene

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