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Aliases for GC02P200578 Gene

Subcategory (RNA class) for GC02P200578 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for GC02P200578 Gene

No Aliases found

ORGUL Members for GC02P200578 Gene

No data available for External Ids for GC02P200578 Gene

Summaries for GC02P200578 Gene

GeneCards Summary for GC02P200578 Gene

GC02P200578 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC02P200578 Gene

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

Additional gene information for GC02P200578 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC02P200578 Gene

Genomics for GC02P200578 Gene

GeneHancer (GH) Regulatory Elements for GC02P200578 Gene

Promoters and enhancers for GC02P200578 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I200585 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 0.4 +8.2 8244 1.5 ELF3 ARID4B SIN3A DMAP1 ZNF48 ZBTB40 RAD21 YY1 THAP11 GMEB2 AOX1 SGO2 GC02P200578 GC02M200587
GH02I200614 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +39.3 39331 4.8 CTCF FOXA2 JUN MAX EBF1 BATF RAD21 YY1 TEAD3 GATA3 AOX1 SGO2 GC02M200587 GC02P200578
GH02I200608 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 +31.3 31333 2.1 JUN ZMYM3 BATF IRF4 POLR2A FOSL2 FOS SMARCC1 CEBPB JUNB AOX1 SGO2 BICD1P1 GC02M200587 GC02P200578
GH02I200603 Enhancer 1 ENCODE dbSUPER 0.3 +26.2 26236 2.1 ELF3 TFAP4 FOXA2 SAP130 JUN CEBPG TEAD3 SLC30A9 RCOR1 ATF7 SGO2 AOX1 GC02M200587 GC02P200578
GH02I200596 Enhancer 0.6 ENCODE 0.4 +18.8 18752 1.3 FOXA2 RFX1 SAP130 SP5 ZNF133 HNF1A RFX3 ZNF558 AOX1 GC02P200578 GC02M200587
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC02P200578 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC02P200578 Gene

Genomic Locations for GC02P200578 Gene
chr2:200,578,045-200,771,119
(GRCh38/hg38)
Size:
193,075 bases
Orientation:
Plus strand

Genomic View for GC02P200578 Gene

Genes around GC02P200578 on UCSC Golden Path with GeneCards custom track

GC02P200578 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC02P200578 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC02P200578 Gene

Proteins for GC02P200578 Gene

Post-translational modifications for GC02P200578 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC02P200578 Gene

Domains & Families for GC02P200578 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC02P200578 Gene

Function for GC02P200578 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC02P200578 Gene

Localization for GC02P200578 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC02P200578 Gene

Pathways & Interactions for GC02P200578 Gene

SuperPathways for GC02P200578 Gene

No Data Available

Interacting Proteins for GC02P200578 Gene

Gene Ontology (GO) - Biological Process for GC02P200578 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC02P200578 Gene

Drugs & Compounds for GC02P200578 Gene

No Compound Related Data Available

Transcripts for GC02P200578 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC02P200578 Gene

No ASD Table

Relevant External Links for GC02P200578 Gene

GeneLoc Exon Structure for
GC02P200578

No data available for mRNA/cDNA for GC02P200578 Gene

Expression for GC02P200578 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC02P200578 Gene

Orthologs for GC02P200578 Gene

No data available for Orthologs and Evolution for GC02P200578 Gene

Paralogs for GC02P200578 Gene

No data available for Paralogs for GC02P200578 Gene

Variants for GC02P200578 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC02P200578 Gene

Disorders for GC02P200578 Gene

No disorders were found for GC02P200578 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC02P200578 Gene

Publications for GC02P200578 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC02P200578 Gene

Sources for GC02P200578 Gene

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