Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC02P195515 Gene

Subcategory (RNA class) for GC02P195515 Gene

snRNA

Quality Score for this RNA gene is

15

Aliases for GC02P195515 Gene

No Aliases found

ORGUL Members for GC02P195515 Gene

No data available for External Ids for GC02P195515 Gene

Summaries for GC02P195515 Gene

GeneCards Summary for GC02P195515 Gene

GC02P195515 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC02P195515 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

Additional gene information for GC02P195515 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC02P195515 Gene

Genomics for GC02P195515 Gene

GeneHancer (GH) Regulatory Elements for GC02P195515 Gene

Promoters and enhancers for GC02P195515 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J195513 Enhancer 0.9 ENCODE 650.7 -0.7 -663 0.2 PKNOX1 ATF1 ARNT TCF12 GATA2 ZNF263 NCOA1 ZNF592 MBD2 MEF2D GC02P195515 RNU6-169P ENSG00000271893 GC02M195464
GH02J195486 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -26.8 -26754 2.4 PKNOX1 ATF1 ARNT NCOA2 TCF12 ZNF766 GATA2 FOS ATF7 NCOA1 GC02M195464 ENSG00000271893 GC02P195515
GH02J195473 Enhancer 0.8 ENCODE dbSUPER 0.3 -40.0 -40022 0.4 BCOR MEIS2 RNF2 TEAD4 TRIM22 CBFA2T3 ZMYM3 SMARCA4 ZNF512 ADNP GC02M195464 ENSG00000224099 ENSG00000271893 GC02P195515
GH02J195477 Enhancer 0.6 ENCODE dbSUPER 0.3 -36.2 -36243 0.2 JUND POLR2A KDM1A LINC01827 SLC39A10 GC02M195464 ENSG00000224099 GC02P195515 ENSG00000271893
GH02J195469 Enhancer 0.6 dbSUPER 0.3 -42.3 -42315 3.5 SMAD5 TEAD4 CEBPB GTF2B ZMYM3 CEBPG ATF4 ZNF316 POLR2A ADNP ENSG00000272211 GC02M195464 ENSG00000224099 ENSG00000271893 GC02P195515
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC02P195515 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC02P195515 Gene

Genomic Locations for GC02P195515 Gene
chr2:195,514,035-195,514,142
(GRCh38/hg38)
Size:
108 bases
Orientation:
Plus strand

Genomic View for GC02P195515 Gene

Genes around GC02P195515 on UCSC Golden Path with GeneCards custom track

GC02P195515 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC02P195515 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC02P195515 Gene

Proteins for GC02P195515 Gene

Post-translational modifications for GC02P195515 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC02P195515 Gene

Domains & Families for GC02P195515 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC02P195515 Gene

Function for GC02P195515 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC02P195515 Gene

Localization for GC02P195515 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC02P195515 Gene

Pathways & Interactions for GC02P195515 Gene

SuperPathways for GC02P195515 Gene

No Data Available

Interacting Proteins for GC02P195515 Gene

Gene Ontology (GO) - Biological Process for GC02P195515 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC02P195515 Gene

Drugs & Compounds for GC02P195515 Gene

No Compound Related Data Available

Transcripts for GC02P195515 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC02P195515 Gene

No ASD Table

Relevant External Links for GC02P195515 Gene

GeneLoc Exon Structure for
GC02P195515

No data available for mRNA/cDNA for GC02P195515 Gene

Expression for GC02P195515 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC02P195515 Gene

Orthologs for GC02P195515 Gene

No data available for Orthologs and Evolution for GC02P195515 Gene

Paralogs for GC02P195515 Gene

No data available for Paralogs for GC02P195515 Gene

Variants for GC02P195515 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC02P195515 Gene

Disorders for GC02P195515 Gene

No disorders were found for GC02P195515 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC02P195515 Gene

Publications for GC02P195515 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H … Engberg J (Journal of molecular biology 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

Products for GC02P195515 Gene

Sources for GC02P195515 Gene

Content
Loading form....