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Aliases for GC02P191122 Gene

Subcategory (RNA class) for GC02P191122 Gene

snRNA

Quality Score for this RNA gene is

15

Aliases for GC02P191122 Gene

No Aliases found

ORGUL Members for GC02P191122 Gene

No data available for External Ids for GC02P191122 Gene

Summaries for GC02P191122 Gene

GeneCards Summary for GC02P191122 Gene

GC02P191122 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC02P191122 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

Additional gene information for GC02P191122 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC02P191122 Gene

Genomics for GC02P191122 Gene

GeneHancer (GH) Regulatory Elements for GC02P191122 Gene

Promoters and enhancers for GC02P191122 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J191122 Enhancer 0.6 dbSUPER 650.7 +0.9 864 1.1 NR2F1 JUNB BATF ATF2 IRF4 BCL11A TARDBP IKZF1 ATF7 ETV6 GC02P191122 RNU6-959P ENSG00000280083 STAT4
GH02J191112 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -7.4 -7443 4.7 PKNOX1 ESRRA PAX8 BATF EED ATF7 ETV6 IKZF2 RUNX3 CREM STAT4 ENSG00000227542 MYO1B GC02P191122 GC02P191061
GH02J191108 Enhancer 0.6 dbSUPER 0.4 -12.5 -12492 2.2 FOXA2 CBFB EBF1 DPF2 BATF ATF2 BCL11A IKZF1 EED IKZF2 STAT4 ENSG00000227542 MYO1B GC02P191122 GC02P191061
GH02J191063 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -56.7 -56712 3.7 ZNF384 FEZF1 ATF2 FOXA1 ZNF335 CTBP1 PRDM6 BCL6B PRDM10 ATF7 NAB1 STAT4 GLS HIBCH STAT1 GC02P191061 GC02P191122
GH02J191076 Enhancer 0.3 dbSUPER 0.3 -43.7 -43706 2.9 PRDM1 RNU6-959P HIBCH GC02P191061 GC02P191122 STAT4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC02P191122 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC02P191122 Gene

Genomic Locations for GC02P191122 Gene
chr2:191,121,949-191,122,056
(GRCh38/hg38)
Size:
108 bases
Orientation:
Plus strand

Genomic View for GC02P191122 Gene

Genes around GC02P191122 on UCSC Golden Path with GeneCards custom track

GC02P191122 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC02P191122 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC02P191122 Gene

Proteins for GC02P191122 Gene

Post-translational modifications for GC02P191122 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC02P191122 Gene

Domains & Families for GC02P191122 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC02P191122 Gene

Function for GC02P191122 Gene

Phenotypes From GWAS Catalog for GC02P191122 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC02P191122 Gene

Localization for GC02P191122 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC02P191122 Gene

Pathways & Interactions for GC02P191122 Gene

SuperPathways for GC02P191122 Gene

No Data Available

Interacting Proteins for GC02P191122 Gene

Gene Ontology (GO) - Biological Process for GC02P191122 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC02P191122 Gene

Drugs & Compounds for GC02P191122 Gene

No Compound Related Data Available

Transcripts for GC02P191122 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC02P191122 Gene

No ASD Table

Relevant External Links for GC02P191122 Gene

GeneLoc Exon Structure for
GC02P191122

No data available for mRNA/cDNA for GC02P191122 Gene

Expression for GC02P191122 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC02P191122 Gene

Orthologs for GC02P191122 Gene

No data available for Orthologs and Evolution for GC02P191122 Gene

Paralogs for GC02P191122 Gene

No data available for Paralogs for GC02P191122 Gene

Variants for GC02P191122 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC02P191122 Gene

Disorders for GC02P191122 Gene

No disorders were found for GC02P191122 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC02P191122 Gene

Publications for GC02P191122 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H … Engberg J (Journal of molecular biology 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

Products for GC02P191122 Gene

Sources for GC02P191122 Gene

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