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Aliases for GC02P185663 Gene

Subcategory (RNA class) for GC02P185663 Gene

snoRNA

Quality Score for this RNA gene is

12

Aliases for GC02P185663 Gene

No Aliases found

ORGUL Members for GC02P185663 Gene

No data available for External Ids for GC02P185663 Gene

Summaries for GC02P185663 Gene

GeneCards Summary for GC02P185663 Gene

GC02P185663 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC02P185663 Gene

  • C_D_box_snoRNA: Most box C/D snoRNAs also contain long (>10 nt) sequences complementary to rRNA. Boxes C and D, as well as boxes C' and D', are usually located in close proximity, and form a structure known as the box C/D motif. This motif is important for snoRNA stability, processing, nucleolar targeting and function. A small number of box C/D snoRNAs are involved in rRNA processing; most, however, are known or predicted to serve as guide RNAs in ribose methylation of rRNA. Targeting involves direct base pairing of the snoRNA at the rRNA site to be modified and selection of a rRNA nucleotide a fixed distance from box D or D'.

Additional gene information for GC02P185663 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC02P185663 Gene

Genomics for GC02P185663 Gene

GeneHancer (GH) Regulatory Elements for GC02P185663 Gene

Promoters and enhancers for GC02P185663 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I185643 Enhancer 0.9 ENCODE dbSUPER 0.4 -17.2 -17151 2.5 ELF3 SOX13 TFAP4 FOXA2 SAP130 ZNF384 CEBPG BATF ZNF644 RARA FSIP2-AS1 LOC101927196 FSIP2 GC02P185663 ELF2P4
GH02I185635 Enhancer 0.5 dbSUPER 0.3 -23.5 -23480 6.2 MAFF ZNF316 MAFG MAFK EMSY LOC101927196 ENSG00000212581 FSIP2-AS1 FSIP2 GC02P185663 ELF2P4
GH02I185582 Enhancer 0.6 ENCODE 0.2 -78.3 -78329 1.4 JUND FOXA2 JUN STAT3 CEBPB FOSL2 FOS EP300 LOC101927196 ENSG00000212581 ELF2P4 GC02P185663
GH02I185623 Enhancer 0.2 dbSUPER 0.3 -37.0 -36979 3.5 LOC101927196 ENSG00000212581 FSIP2 GC02P185663 ELF2P4
GH02I185627 Enhancer 0.2 dbSUPER 0.3 -33.7 -33704 1 LOC101927196 FSIP2 GC02P185663 ELF2P4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC02P185663 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC02P185663 Gene

Genomic Locations for GC02P185663 Gene
chr2:185,661,773-185,661,906
(GRCh38/hg38)
Size:
134 bases
Orientation:
Plus strand

Genomic View for GC02P185663 Gene

Genes around GC02P185663 on UCSC Golden Path with GeneCards custom track

GC02P185663 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC02P185663 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC02P185663 Gene

Proteins for GC02P185663 Gene

Post-translational modifications for GC02P185663 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC02P185663 Gene

Domains & Families for GC02P185663 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC02P185663 Gene

Function for GC02P185663 Gene

Animal Model Products

miRNA for GC02P185663 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC02P185663 Gene

Localization for GC02P185663 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC02P185663 Gene

Pathways & Interactions for GC02P185663 Gene

SuperPathways for GC02P185663 Gene

No Data Available

Interacting Proteins for GC02P185663 Gene

Gene Ontology (GO) - Biological Process for GC02P185663 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC02P185663 Gene

Drugs & Compounds for GC02P185663 Gene

No Compound Related Data Available

Transcripts for GC02P185663 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC02P185663 Gene

No ASD Table

Relevant External Links for GC02P185663 Gene

GeneLoc Exon Structure for
GC02P185663

No data available for mRNA/cDNA for GC02P185663 Gene

Expression for GC02P185663 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC02P185663 Gene

Orthologs for GC02P185663 Gene

No data available for Orthologs and Evolution for GC02P185663 Gene

Paralogs for GC02P185663 Gene

No data available for Paralogs for GC02P185663 Gene

Variants for GC02P185663 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC02P185663 Gene

Disorders for GC02P185663 Gene

No disorders were found for GC02P185663 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC02P185663 Gene

Publications for GC02P185663 Gene

  1. The U8 snoRNA gene family: identification and characterization of distinct, functional U8 genes in Xenopus. (PMID: 11675000) Peculis BA … McDowell K (Gene 2001) 1
  2. The sequence of the 5' end of the U8 small nucleolar RNA is critical for 5.8S and 28S rRNA maturation. (PMID: 9199304) Peculis BA (Molecular and cellular biology 1997) 1

Products for GC02P185663 Gene

Sources for GC02P185663 Gene

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