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Aliases for GC02P144429 Gene

Subcategory (RNA class) for GC02P144429 Gene

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Quality Score for this RNA gene is

13.4

Aliases for GC02P144429 Gene

No Aliases found

ORGUL Members for GC02P144429 Gene

No data available for External Ids for GC02P144429 Gene

Summaries for GC02P144429 Gene

GeneCards Summary for GC02P144429 Gene

GC02P144429 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC02P144429 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC02P144429

Additional gene information for GC02P144429 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC02P144429 Gene

Genomics for GC02P144429 Gene

GeneHancer (GH) Regulatory Elements for GC02P144429 Gene

Promoters and enhancers for GC02P144429 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J144425 Enhancer 1.5 UCNEbase Ensembl ENCODE dbSUPER 650.7 -1.9 -1924 2.5 ELF3 SOX13 SAP130 JUN TEAD3 ZNF316 FOS ATF7 ZNF600 MAFK GC02P144429 GC02M144385 ZEB2
GH02J144430 Enhancer 0.4 ENCODE dbSUPER 650.7 +0.2 233 0 GC02P144429 GC02P144443 ZEB2
GH02J144429 Enhancer 2 VISTA UCNEbase Ensembl ENCODE dbSUPER 0.7 +2.4 2398 3.9 PKNOX1 ZSCAN4 INSM2 FEZF1 BATF ZNF2 IRF4 ZNF213 ZNF366 ZSCAN5C GC02P144429 GC02P144443 ZEB2
GH02J144412 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -14.7 -14714 3.7 FOXA2 JUN MAX CEBPG BATF YY1 POLR2A HNF4G RBM22 FOSL2 ZEB2 GTDC1 GC02P144429 GC02M144385
GH02J144439 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +12.0 12009 2.5 PKNOX1 SMAD1 ARNT NCOA2 TCF12 ZNF766 GATA2 E2F8 ATF7 NCOA1 GC02P144443 GC02P144429 ZEB2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC02P144429 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC02P144429 Gene

Genomic Locations for GC02P144429 Gene
chr2:144,429,165-144,429,337
(GRCh38/hg38)
Size:
173 bases
Orientation:
Plus strand

Genomic View for GC02P144429 Gene

Genes around GC02P144429 on UCSC Golden Path with GeneCards custom track

GC02P144429 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC02P144429 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC02P144429 Gene

ORGUL Member Location for GC02P144429 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC02P144429 Gene

Proteins for GC02P144429 Gene

Post-translational modifications for GC02P144429 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC02P144429 Gene

Domains & Families for GC02P144429 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC02P144429 Gene

Function for GC02P144429 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC02P144429 Gene

Localization for GC02P144429 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC02P144429 Gene

Pathways & Interactions for GC02P144429 Gene

SuperPathways for GC02P144429 Gene

No Data Available

Interacting Proteins for GC02P144429 Gene

Gene Ontology (GO) - Biological Process for GC02P144429 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC02P144429 Gene

Drugs & Compounds for GC02P144429 Gene

No Compound Related Data Available

Transcripts for GC02P144429 Gene

fRNAdb Secondary structures for GC02P144429 Gene

  • FR006103
  • FR221957

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC02P144429 Gene

No ASD Table

Relevant External Links for GC02P144429 Gene

GeneLoc Exon Structure for
GC02P144429

No data available for mRNA/cDNA for GC02P144429 Gene

Expression for GC02P144429 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC02P144429 Gene

Orthologs for GC02P144429 Gene

No data available for Orthologs and Evolution for GC02P144429 Gene

Paralogs for GC02P144429 Gene

No data available for Paralogs for GC02P144429 Gene

Variants for GC02P144429 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC02P144429 Gene

Disorders for GC02P144429 Gene

No disorders were found for GC02P144429 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC02P144429 Gene

Publications for GC02P144429 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC02P144429 Gene

Sources for GC02P144429 Gene

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