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Aliases for GC02P144158 Gene

Subcategory (RNA class) for GC02P144158 Gene

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Quality Score for this RNA gene is

13.4

Aliases for GC02P144158 Gene

No Aliases found

ORGUL Members for GC02P144158 Gene

No data available for External Ids for GC02P144158 Gene

Summaries for GC02P144158 Gene

GeneCards Summary for GC02P144158 Gene

GC02P144158 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC02P144158 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC02P144158

Additional gene information for GC02P144158 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC02P144158 Gene

Genomics for GC02P144158 Gene

GeneHancer (GH) Regulatory Elements for GC02P144158 Gene

Promoters and enhancers for GC02P144158 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J144151 Enhancer 1.1 Ensembl ENCODE 0.4 -5.6 -5622 1.7 HDAC1 PKNOX1 ARNT FEZF1 RAD21 CHAMP1 ZNF335 TCF12 ZNF766 NCOA1 GC02P144158 GC02M144126 GTDC1
GH02J144183 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.3 +25.6 25613 1.3 PKNOX1 CBFB JUNB ELF1 BATF ATF2 BCL11A IKZF1 ATF7 ETV6 ZEB2 GTDC1 GC02P144158
GH02J144152 Enhancer 0.8 ENCODE 0.4 -6.7 -6673 0 HDAC1 PKNOX1 ARNT CHAMP1 TCF12 ZNF766 GATA2 CREM NCOA1 GATAD2B GC02P144158 GC02M144126 GTDC1
GH02J144137 Enhancer 0.8 Ensembl ENCODE 0.3 -20.1 -20062 1.5 BCOR MEIS2 PKNOX1 FOXA2 ZMYM3 RARA SKI POLR2A ADNP ZBTB33 GC02M144126 GC02P144158 GTDC1
GH02J144198 Enhancer 0.8 Ensembl ENCODE 0.3 +40.0 40004 0.6 ATF1 JUN HLF CEBPB CEBPG ELF1 ZNF384 E4F1 ATF2 ATF4 GC02P144158 GTDC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC02P144158 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC02P144158 Gene

Genomic Locations for GC02P144158 Gene
chr2:144,158,296-144,158,462
(GRCh38/hg38)
Size:
167 bases
Orientation:
Plus strand

Genomic View for GC02P144158 Gene

Genes around GC02P144158 on UCSC Golden Path with GeneCards custom track

GC02P144158 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC02P144158 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC02P144158 Gene

ORGUL Member Location for GC02P144158 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC02P144158 Gene

Proteins for GC02P144158 Gene

Post-translational modifications for GC02P144158 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC02P144158 Gene

Domains & Families for GC02P144158 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC02P144158 Gene

Function for GC02P144158 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC02P144158 Gene

Localization for GC02P144158 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC02P144158 Gene

Pathways & Interactions for GC02P144158 Gene

SuperPathways for GC02P144158 Gene

No Data Available

Interacting Proteins for GC02P144158 Gene

Gene Ontology (GO) - Biological Process for GC02P144158 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC02P144158 Gene

Drugs & Compounds for GC02P144158 Gene

No Compound Related Data Available

Transcripts for GC02P144158 Gene

fRNAdb Secondary structures for GC02P144158 Gene

  • FR008925
  • FR318129

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC02P144158 Gene

No ASD Table

Relevant External Links for GC02P144158 Gene

GeneLoc Exon Structure for
GC02P144158

No data available for mRNA/cDNA for GC02P144158 Gene

Expression for GC02P144158 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC02P144158 Gene

Orthologs for GC02P144158 Gene

No data available for Orthologs and Evolution for GC02P144158 Gene

Paralogs for GC02P144158 Gene

No data available for Paralogs for GC02P144158 Gene

Variants for GC02P144158 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC02P144158 Gene

Disorders for GC02P144158 Gene

No disorders were found for GC02P144158 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC02P144158 Gene

Publications for GC02P144158 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC02P144158 Gene

Sources for GC02P144158 Gene

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